RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RHCGQ9UBD6 479 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 EGFL7Q9UHF1 273 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 SAMD4AQ9UPU9 718 aaKnown RBP14.59□□□□□ -0.07
HMGN4-201ENST00000377575 FKBP7Q9Y680 259 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 TLN2Q9Y4G6 2542 aa14.58□□□□□ -0.07
HMGN4-201ENST00000377575 FFAR1O14842 300 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 CSF3P09919 207 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 OR4A8P0C604 315 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ACADSP16219 412 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF14P17017 642 aaPredicted RBP14.58□□□□□ -0.08
HMGN4-201ENST00000377575 GIPRP48546 466 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 EFNA4P52798 201 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 PIGFQ07326 219 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 DAG1Q14118 895 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 EFNB3Q15768 340 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ADIPOQQ15848 244 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 HIST3H3Q16695 136 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ANKDD1AQ495B1 522 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 NRN1LQ496H8 165 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 LRFN4Q6PJG9 635 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 DPPA2Q7Z7J5 298 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 CDK20Q8IZL9 346 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 MOSPD2Q8NHP6 518 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 MCHR2Q969V1 340 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF347Q96SE7 839 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 SEPHS2Q99611 448 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 MRPL13Q9BYD1 178 aaKnown RBP14.58□□□□□ -0.08
HMGN4-201ENST00000377575 REG4Q9BYZ8 158 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 TXNIPQ9H3M7 391 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ANKRD19PQ9H560 264 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 NOX3Q9HBY0 568 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 NDE1Q9NXR1 346 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF224Q9NZL3 707 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 TAGLN3Q9UI15 199 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 SPEF1Q9Y4P9 236 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 ENPP4Q9Y6X5 453 aa14.58□□□□□ -0.08
HMGN4-201ENST00000377575 EFCAB9A8MZ26 197 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 TRMUO75648 421 aaKnown RBP14.57□□□□□ -0.08
HMGN4-201ENST00000377575 PRSS23O95084 383 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 SLC9A3P48764 834 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 RAB1AP62820 205 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 HGFACQ04756 655 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 PRKCDQ05655 676 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 RUNX1T1Q06455 604 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 SNTB2Q13425 540 aaKnown RBP14.57□□□□□ -0.08
HMGN4-201ENST00000377575 TOP3AQ13472 1001 aaPredicted RBP14.57□□□□□ -0.08
HMGN4-201ENST00000377575 MST1LQ2TV78 715 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 FAM205BPQ63HN1 556 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 GLYATQ6IB77 296 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 KRT80Q6KB66 452 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 MBOAT2Q6ZWT7 520 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 RRM2BQ7LG56 351 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 PIGWQ7Z7B1 504 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 SKA3Q8IX90 412 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 PGAM4Q8N0Y7 254 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 SYT14Q8NB59 555 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 HTRA1Q92743 480 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 POM121Q96HA1 1249 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 NDEL1Q9GZM8 345 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 MAGEL2Q9UJ55 1249 aa14.57□□□□□ -0.08
HMGN4-201ENST00000377575 FAM32AQ9Y421 112 aaKnown RBP14.57□□□□□ -0.08
HMGN4-201ENST00000377575 IGHMP01871 453 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 HSD17B1P14061 328 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 NPR2P20594 1047 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 MAKP20794 623 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 THBS4P35443 961 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 PPOXP50336 477 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 RPS23P62266 143 aaKnown RBP14.56□□□□□ -0.08
HMGN4-201ENST00000377575 MYBPC1Q00872 1141 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 GALK2Q01415 458 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 CD47Q08722 323 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 LAPTM4AQ15012 233 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 SLC36A2Q495M3 483 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 SAMD4BQ5PRF9 694 aaKnown RBP14.56□□□□□ -0.08
HMGN4-201ENST00000377575 C10orf128Q5T292 105 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 ARMC4Q5T2S8 1044 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 TMEM53Q6P2H8 277 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 OAFQ86UD1 273 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF525Q8N782 197 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 RNF148Q8N7C7 305 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 RBM15BQ8NDT2 890 aaKnown RBP14.56□□□□□ -0.08
HMGN4-201ENST00000377575 OR4K5Q8NGD3 323 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF75AQ96N20 296 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 ALG12Q9BV10 488 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 PLK3Q9H4B4 646 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 NMNAT1Q9HAN9 279 aaPredicted RBP14.56□□□□□ -0.08
HMGN4-201ENST00000377575 SMURF2Q9HAU4 748 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 DCAF13Q9NV06 445 aaKnown RBP14.56□□□□□ -0.08
HMGN4-201ENST00000377575 TMEM5Q9Y2B1 443 aa14.56□□□□□ -0.08
HMGN4-201ENST00000377575 HIVEP2P31629 2446 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 TRAV27A0A087WT01 109 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 A0A087WUU8 490 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 hCG_2039718K7EN88 272 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 MGRN1O60291 552 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 F12P00748 615 aaPredicted RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 H1F0P07305 194 aaKnown RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 ERCC1P07992 297 aaPredicted RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 HOXB4P17483 251 aaPredicted RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 RHCEP18577 417 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 FUT4P22083 530 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms