RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 LCN10Q6JVE6 187 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 ARSKQ6UWY0 536 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 SLC35D2Q76EJ3 337 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 OR2G2Q8NGZ5 317 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 FYTTD1Q96QD9 318 aaKnown RBP18.22■□□□□ 0.51
VSX1-202ENST00000376709 GFI1Q99684 422 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 MARVELD1Q9BSK0 173 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 OCIAD1Q9NX40 245 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 SLCO1C1Q9NYB5 712 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 VSX1Q9NZR4 365 aaPredicted RBP18.22■□□□□ 0.51
VSX1-202ENST00000376709 V9GY05 133 aa18.22■□□□□ 0.51
VSX1-202ENST00000376709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.21■□□□□ 0.51
VSX1-202ENST00000376709 YKT6O15498 198 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 HLA-DMAP28067 261 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 SLC6A1P30531 599 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 APOBEC1P41238 236 aaKnown RBP18.21■□□□□ 0.51
VSX1-202ENST00000376709 SRP9P49458 86 aaKnown RBP18.21■□□□□ 0.51
VSX1-202ENST00000376709 BLVRAP53004 296 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 SUMO3P55854 103 aaPredicted RBP18.21■□□□□ 0.51
VSX1-202ENST00000376709 ODF4Q2M2E3 257 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 FAM69BQ5VUD6 431 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 HACD4Q5VWC8 232 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 KDM8Q8N371 416 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 ADAMTS14Q8WXS8 1223 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 AMELYQ99218 206 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 C19orf25Q9UFG5 118 aaPredicted RBP18.21■□□□□ 0.51
VSX1-202ENST00000376709 ALG5Q9Y673 324 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 CACNG2Q9Y698 323 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 ANKRD61A6NGH8 418 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 TMEM212A6NML5 194 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 FTCDNL1E5RQL4 147 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 IGHMP01871 453 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 SPARCP09486 303 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 CTLA4P16410 223 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 IL11P20809 199 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 MMP15P51511 669 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 CD83Q01151 205 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 PUDPQ08623 228 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 OR7A5Q15622 319 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 LRRN1Q6UXK5 716 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 BAIAP2L2Q6UXY1 529 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 OR8K3Q8NH51 312 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 CREB3L1Q96BA8 519 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 ARL5BQ96KC2 179 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 GFM1Q96RP9 751 aaKnown RBP18.21■□□□□ 0.51
VSX1-202ENST00000376709 OR2B2Q9GZK3 357 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 WDFY3Q8IZQ1 3526 aa18.21■□□□□ 0.51
VSX1-202ENST00000376709 SLC22A23A1A5C7 686 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 OR4C45A6NMZ5 311 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 HSPB2A8KAH6 182 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 MEN1O00255 615 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ZFAND5O76080 213 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 CD3GP09693 182 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 NAGAP17050 411 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ADAM8P78325 824 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 RASGEF1BQ0VAM2 473 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 HSPB2Q16082 182 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ETFDHQ16134 617 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 MEP1BQ16820 701 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 TRIM61Q5EBN2 209 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 TMEM53Q6P2H8 277 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 STAC2Q6ZMT1 411 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 TOMM5Q8N4H5 51 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 TTC9Q92623 222 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 CMTM3Q96MX0 182 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 LIN7BQ9HAP6 207 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 PPP4R1LQ9P1A2 415 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 MYOTQ9UBF9 498 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 CAMK2AQ9UQM7 478 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 PCDHGA9Q9Y5G4 932 aaKnown RBP18.2■□□□□ 0.5
VSX1-202ENST00000376709 IGLV1-36A0A0B4J1U3 117 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 CENPXA8MT69 81 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ZNF432O94892 652 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ONECUT2O95948 504 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 HLA-DOBP13765 273 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 AGFG1P52594 562 aaKnown RBP18.2■□□□□ 0.5
VSX1-202ENST00000376709 MRPS15P82914 257 aaKnown RBP18.2■□□□□ 0.5
VSX1-202ENST00000376709 DGCR2P98153 550 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 MFSD13AQ14CX5 517 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 SLC18B1Q6NT16 456 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 CMTM4Q8IZR5 234 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ASB17Q8WXJ9 295 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 YIPF5Q969M3 257 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 DDIT4LQ96D03 193 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ZC3H10Q96K80 434 aaKnown RBP18.2■□□□□ 0.5
VSX1-202ENST00000376709 GTPBP2Q9BX10 602 aaKnown RBP18.2■□□□□ 0.5
VSX1-202ENST00000376709 ELOVL3Q9HB03 270 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 ANKRD10Q9NXR5 420 aa18.2■□□□□ 0.5
VSX1-202ENST00000376709 TRBV5-5A0A0J9YX44 114 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 INMT-MINDY4F8WBC2 141 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 H3BSH0 61 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 ZNF254O75437 659 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 OR2J2O76002 312 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 ZNF41P51814 821 aaPredicted RBP18.19■□□□□ 0.5
VSX1-202ENST00000376709 CLDN12P56749 244 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 RAB25P57735 213 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 GLO1Q04760 184 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 FOXF1Q12946 379 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 LPAL2Q16609 132 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms