RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 OR9K2Q8NGE7 335 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 OR13C5Q8NGS8 318 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 BRIX1Q8TDN6 353 aaKnown RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 FAIMQ9NVQ4 179 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 HRKO00198 91 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 DIRAS3O95661 229 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ZNF44P15621 663 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 MTCP1P56278 107 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 PCBD1P61457 104 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 SGCZQ96LD1 299 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 GNRHR2Q96P88 292 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ARL6Q9H0F7 186 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 PCDHGA1Q9Y5H4 931 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 HRH3Q9Y5N1 445 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ANKRD30BLA7E2S9 258 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 OR7C1O76099 320 aaPredicted RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 CCL4P13236 92 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 CCDC58Q4VC31 144 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 CRIPAKQ8N1N5 446 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC25A43Q8WUT9 341 aaPredicted RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ORAI1Q96D31 301 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 DCLRE1CQ96SD1 692 aaKnown RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 CHST11Q9NPF2 352 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 M0R233 179 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 IFNA7P01567 189 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 QDPRP09417 244 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 S100A1P23297 94 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 UQCRC1P31930 480 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 FOXF1Q12946 379 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC16A9Q7RTY1 509 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 BHLHE23Q8NDY6 225 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 KTI12Q96EK9 354 aaPredicted RBP16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 C1QTNF6Q9BXI9 259 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 PLCXD1Q9NUJ7 323 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 TMEM129A0AVI4 362 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 TBX19O60806 448 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 SCGNO76038 276 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 CNOT4O95628 575 aaKnown RBP16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 MPEG1Q2M385 716 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 DNAAF1Q8NEP3 725 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 ZNF700Q9H0M5 742 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC22A11Q9NSA0 550 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 POLEQ07864 2286 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 SERTM1A2A2V5 107 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 PVALBP20472 110 aaPredicted RBP16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 VEGFCP49767 419 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 GLYATL3Q5SZD4 288 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 STEAP3Q658P3 488 aa16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 CGGBP1Q9UFW8 167 aaPredicted RBP16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 TMEM184BQ9Y519 407 aaPredicted RBP16.36■□□□□ 0.21
PTPDC1-202ENST00000375360 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 TRDV1A0A1B0GX56 115 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 F5H0A9 414 aaPredicted RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 SURF4O15260 269 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 CBX7O95931 251 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 FCGR2AP12318 317 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 PEBP1P30086 187 aaKnown RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 RPS18P62269 152 aaKnown RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 GALEQ14376 348 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 UBE2UQ5VVX9 321 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 TMEM53Q6P2H8 277 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 CHST2Q9Y4C5 530 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 PTPRFP10586 1907 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 ROS1P08922 2347 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 GPR171O14626 319 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 DVL2O14641 736 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 NTN1O95631 604 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 TGM4P49221 684 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 DIO1P49895 249 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 C6orf183Q5T699 404 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 OR10G3Q8NGC4 313 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 OR52A1Q9UKL2 312 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 UBE2J1Q9Y385 318 aaPredicted RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 DNAJB6O75190 326 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 RAB2AP61019 212 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 DUSP2Q05923 314 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 SF3A2Q15428 464 aaKnown RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 ELMOD2Q8IZ81 293 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 BATF2Q8N1L9 274 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 ZNF454Q8N9F8 522 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 SPACA9Q96E40 222 aaPredicted RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 SELENOIQ9C0D9 397 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 FKRPQ9H9S5 495 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 OR6C76A6NM76 312 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 DBPQ10586 325 aaPredicted RBP16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC36A2Q495M3 483 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 IL1F10Q8WWZ1 152 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 CDCA4Q9BXL8 241 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 S1PR5Q9H228 398 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 OBP2BQ9NPH6 170 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC5A6Q9Y289 635 aa16.35■□□□□ 0.21
PTPDC1-202ENST00000375360 TEKQ02763 1124 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 MKXQ8IYA7 352 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC22A18ASQ8N1D0 253 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 ISG20L2Q9H9L3 353 aaKnown RBP16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 PLA2G3Q9NZ20 509 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 WASF3Q9UPY6 502 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 MEIOCA2RUB1 952 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms