RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 BADQ92934 168 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 KCNK15Q9H427 330 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 ZNF230Q9UIE0 474 aaPredicted RBP19.19■□□□□ 0.66
UPF3A-202ENST00000375299 FBXO9Q9UK97 447 aaPredicted RBP19.19■□□□□ 0.66
UPF3A-202ENST00000375299 IGKV1D-42A0A075B6H8 117 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 KANTRA0A1W2PQU2 76 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM82A0PJX8 343 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 TVP23AA6NH52 213 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 CD14P08571 375 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 SLC35E2P0CK97 266 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 SPTBP11277 2137 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 GRK6P43250 576 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 PSMD4P55036 377 aaKnown RBP19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ACTBP60709 375 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ACTG1P63261 375 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 FGL1Q08830 312 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ODF4Q2M2E3 257 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ELP2Q6IA86 826 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 OR10G6Q8NH81 332 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 GPX8Q8TED1 209 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 MCHR2Q969V1 340 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ULBP3Q9BZM4 244 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 SLC19A3Q9BZV2 496 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 SRA1Q9HD15 236 aaKnown RBP19.18■□□□□ 0.66
UPF3A-202ENST00000375299 PURGQ9UJV8 347 aaKnown RBP19.18■□□□□ 0.66
UPF3A-202ENST00000375299 HIF3AQ9Y2N7 669 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 KLF2Q9Y5W3 355 aaPredicted RBP19.18■□□□□ 0.66
UPF3A-202ENST00000375299 C5orf67F2Z3F1 127 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 KAT7O95251 611 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 CSTAP01040 98 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 S1PR1P21453 382 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 CNR1P21554 472 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ADPRHP54922 357 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 TAS2R19P59542 299 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 DMWDQ09019 674 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 KCNAB1Q14722 419 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 C2orf76Q3KRA6 126 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 JMJD6Q6NYC1 403 aaPredicted RBP19.18■□□□□ 0.66
UPF3A-202ENST00000375299 PRSS35Q8N3Z0 413 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 LRRC75AQ8NAA5 344 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 RSC1A1Q92681 617 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 POTEKPQ9BYX7 375 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 WDR13Q9H1Z4 485 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM185BQ9H7F4 350 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 ACTR10Q9NZ32 417 aa19.18■□□□□ 0.66
UPF3A-202ENST00000375299 DCTN6O00399 190 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 ITGA5P08648 1049 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 APEHP13798 732 aaKnown RBP19.17■□□□□ 0.66
UPF3A-202ENST00000375299 SDHAP31040 664 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 CTXN1P60606 82 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 ZNF345Q14585 488 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 OR6N2Q8NGY6 317 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 FAM3CQ92520 227 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 SAV1Q9H4B6 383 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-202ENST00000375299 SLC17A5Q9NRA2 495 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 CYB5R1Q9UHQ9 305 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 GPN3Q9UHW5 284 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-202ENST00000375299 LOC100289279A0A1B0GTE1 492 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 MPDZO75970 2070 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 GJA4P35212 333 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 LUMP51884 338 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-202ENST00000375299 EGR3Q06889 387 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 ENPP2Q13822 863 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 RAB11BQ15907 218 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 ITPRIPL2Q3MIP1 535 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 CLVS2Q5SYC1 327 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 GLT8D1Q68CQ7 371 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 OR5M8Q8NGP6 311 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 OR14C36Q8NHC7 312 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 FAM3DQ96BQ1 224 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 WDR76Q9H967 626 aa19.17■□□□□ 0.66
UPF3A-202ENST00000375299 OR5H14A6NHG9 310 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 BCL2L11O43521 198 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 FOXS1O43638 330 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 SIGLEC6O43699 453 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 OR2F2O95006 317 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 ARHGDIBP52566 201 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 RASGEF1BQ0VAM2 473 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 OR2F1Q13607 317 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 ALG10Q5BKT4 473 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 NPSR1Q6W5P4 371 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 TMED4Q7Z7H5 227 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM229BQ8NBD8 167 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 TSEN15Q8WW01 171 aaKnown RBP19.16■□□□□ 0.66
UPF3A-202ENST00000375299 VSTM2LQ96N03 204 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 SLC25A21Q9BQT8 299 aaPredicted RBP19.16■□□□□ 0.66
UPF3A-202ENST00000375299 TWSG1Q9GZX9 223 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 ATG5Q9H1Y0 275 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 TNFSF18Q9UNG2 199 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 DTX4Q9Y2E6 619 aa19.16■□□□□ 0.66
UPF3A-202ENST00000375299 C2orf16Q68DN1 1984 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 A0A1B0GTI1 187 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 SERINC4A6NH21 518 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 AKR7A3O95154 331 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 RASGRP1O95267 797 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 RAB3DO95716 219 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 FCARP24071 287 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 KIR3DL2P43630 455 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 PGDP52209 483 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 RAB38P57729 211 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms