RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 CARD17Q5XLA6 110 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 LYPD4Q6UWN0 246 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 RFKQ969G6 155 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 LGALS12Q96DT0 336 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 RNFT2Q96EX2 444 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 ADAD1Q96M93 576 aaKnown RBP12.88□□□□□ -0.35
RCC1-201ENST00000373831 SRA1Q9HD15 236 aaKnown RBP12.88□□□□□ -0.35
RCC1-201ENST00000373831 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
RCC1-201ENST00000373831 SCN3BQ9NY72 215 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
RCC1-201ENST00000373831 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.88□□□□□ -0.35
RCC1-201ENST00000373831 CLEC4AQ9UMR7 237 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
RCC1-201ENST00000373831 INTS1Q8N201 2190 aaKnown RBP12.88□□□□□ -0.35
RCC1-201ENST00000373831 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
RCC1-201ENST00000373831 NCOA6Q14686 2063 aaPredicted RBP12.87□□□□□ -0.35
RCC1-201ENST00000373831 IGLV1-36A0A0B4J1U3 117 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 IGHG1P01857 330 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 STSP08842 583 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
RCC1-201ENST00000373831 EDNRAP25101 427 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 PTGS2P35354 604 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 SRSF1Q07955 248 aaKnown RBP eCLIP12.87□□□□□ -0.35
RCC1-201ENST00000373831 LGALS3BPQ08380 585 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
RCC1-201ENST00000373831 PHYHD1Q5SRE7 291 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 B3GNT6Q6ZMB0 384 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 ZBTB46Q86UZ6 589 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 TSPAN14Q8NG11 270 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 TRIB1Q96RU8 372 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 COPS4Q9BT78 406 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 PRRG4Q9BZD6 226 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 BCO1Q9HAY6 547 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
RCC1-201ENST00000373831 KLHL9Q9P2J3 617 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 WARS2Q9UGM6 360 aaKnown RBP12.87□□□□□ -0.35
RCC1-201ENST00000373831 BLOC1S6Q9UL45 172 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
RCC1-201ENST00000373831 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZNF726A6NNF4 738 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 AHRRA9YTQ3 701 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 AHCYL1O43865 530 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 SLC16A7O60669 478 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 GPANK1O95872 356 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 CDK1P06493 297 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 EEF1B2P24534 225 aaKnown RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 C21orf33P30042 268 aaPredicted RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 ST3GAL4Q11206 333 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 RNPS1Q15287 305 aaKnown RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 GTF2IRD2BQ6EKJ0 949 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 LRFN4Q6PJG9 635 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 GTF2IRD2Q86UP8 949 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 OR2T4Q8NH00 348 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 IPCEF1Q8WWN9 437 aaPredicted RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 TMEM54Q969K7 222 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 TMEM45BQ96B21 275 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZMYND19Q96E35 227 aaPredicted RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 RERGLQ9H628 205 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 RNF122Q9H9V4 155 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 EFCAB10A6NFE3 127 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 J3QRE1 110 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 GLCEO94923 617 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 MT-ND2P03891 347 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 CLRN1P58418 232 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 TMED1Q13445 227 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 GGTLC2Q14390 218 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 SLC35D3Q5M8T2 416 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 RTL6Q6ICC9 239 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 RPTNQ6XPR3 784 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 HDDC2Q7Z4H3 204 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 C20orf196Q8IYI0 205 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ZNF511Q8NB15 262 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 PROKR2Q8NFJ6 384 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 FAM57AQ8TBR7 257 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 FOXN4Q96NZ1 517 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 ADGRL4Q9HBW9 690 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 FGF20Q9NP95 211 aaPredicted RBP12.86□□□□□ -0.35
RCC1-201ENST00000373831 HAO2Q9NYQ3 351 aa12.86□□□□□ -0.35
RCC1-201ENST00000373831 TAS2R16Q9NYV7 291 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms