RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FUT5Q11128 374 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SLBPQ14493 270 aaKnown RBP eCLIP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 DUSP5Q16690 384 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 PSRC1Q6PGN9 363 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF664Q8N3J9 261 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 OR10AD1Q8NGE0 317 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SCRT1Q9BWW7 348 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 TEX12Q9BXU0 123 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 KCNE5Q9UJ90 142 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 V9GY05 133 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 A0A087WV48 116 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SLC5A10A0PJK1 596 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 APBB3O95704 486 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 NPSP0C0P6 89 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF25P17030 456 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 CSRP1P21291 193 aaKnown RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SLC2A5P22732 501 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 CD34P28906 385 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF84P51523 738 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 PRKXP51817 358 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 TMEM255BQ8WV15 326 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SMPDL3AQ92484 453 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SUSD6Q92537 303 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 MYADMQ96S97 322 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 RNF126Q9BV68 326 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 RAB33BQ9H082 229 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 EPHX3Q9H6B9 360 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SLC2A4RGQ9NR83 387 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SCML2Q9UQR0 700 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 ADAM18Q9Y3Q7 739 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 NUP210Q8TEM1 1887 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 M0QZQ0 153 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 CALCBP10092 127 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 EPCAMP16422 314 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 IL2RGP31785 369 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 RBM34P42696 430 aaKnown RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 RGS8P57771 180 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SIRPAP78324 504 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 ARF5P84085 180 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 UPP1Q16831 310 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 C1orf53Q5VUE5 145 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 NRROSQ86YC3 692 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 DND1Q8IYX4 353 aaKnown RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 GALNT16Q8N428 558 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 ZSCAN4Q8NAM6 433 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 CCDC107Q8WV48 283 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
SF3A3-201ENST00000373019 NTNG2Q96CW9 530 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 R3HDM4Q96D70 268 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 OR51V1Q9H2C8 321 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 TAS2R8Q9NYW2 309 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 C5AR2Q9P296 337 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 HDGFL3Q9Y3E1 203 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 FLVCR1Q9Y5Y0 555 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 BRWD1Q9NSI6 2320 aa8.7□□□□□ -1.02
SF3A3-201ENST00000373019 TRBV6-7A0A0A0MS04 114 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 TIMP1P01033 207 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 CTSLP07711 333 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 OR4Q2P0C623 313 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 HKR1P10072 659 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 ADRA2CP18825 462 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 SLC6A9P48067 706 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 SLC16A1P53985 500 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 HSPB3Q12988 150 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 RNASE10Q5GAN6 216 aaKnown RBP8.69□□□□□ -1.02
SF3A3-201ENST00000373019 CD300LGQ6UXG3 332 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 MR1Q95460 341 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 ZG16BQ96DA0 208 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 GALNT14Q96FL9 552 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 ATG5Q9H1Y0 275 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 TRPV4Q9HBA0 871 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 C19orf12Q9NSK7 152 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 SH2B3Q9UQQ2 575 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 ZFP37Q9Y6Q3 630 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-201ENST00000373019 TBC1D3BA6NDS4 549 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 MSGN1A6NI15 193 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 M0R036 132 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 OR8U9P0C7N5 309 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 TBC1D3HP0C7X1 549 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 RPS10P46783 165 aaKnown RBP8.69□□□□□ -1.02
SF3A3-201ENST00000373019 MANFP55145 182 aaKnown RBP8.69□□□□□ -1.02
SF3A3-201ENST00000373019 RPS23P62266 143 aaKnown RBP8.69□□□□□ -1.02
SF3A3-201ENST00000373019 RPS24P62847 133 aaKnown RBP8.69□□□□□ -1.02
SF3A3-201ENST00000373019 SCGB2B2Q4G0G5 96 aa8.69□□□□□ -1.02
SF3A3-201ENST00000373019 LYPLAL1Q5VWZ2 237 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms