RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SCGB1D1O95968 90 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 ZNF44P15621 663 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 POLR2HP52434 150 aaKnown RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 ARHGAP11BQ3KRB8 267 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 MS4A6EQ96DS6 147 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 PTDSS2Q9BVG9 487 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 HINT2Q9BX68 163 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 VN1R3Q9BXE9 311 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 PCYT1BQ9Y5K3 369 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 GJE1A6NN92 205 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 NID1P14543 1247 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 ZNF93P35789 620 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 HTD2P86397 168 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 TLE4Q04727 773 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 CLPPQ16740 277 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 TEX19Q8NA77 164 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 OR2AK2Q8NG84 335 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 OR5D18Q8NGL1 313 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 LIN37Q96GY3 246 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 STACQ99469 402 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM231Q9H6L2 316 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 PEX11BO96011 259 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 ACSM4P0C7M7 580 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 RFX2P48378 723 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 KIAA0141Q14154 515 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-202ENST00000369733 MELKQ14680 651 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM164Q5U3C3 297 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 KCNIP4Q6PIL6 250 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 GRAMD2AQ8IUY3 354 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 KIAA1958Q8N8K9 716 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 ZDHHC5Q9C0B5 715 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 GAREM1Q9H706 876 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 SCPEP1Q9HB40 452 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 BCL2L10Q9HD36 194 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 IL23AQ9NPF7 189 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 OR52A1Q9UKL2 312 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 RARRES3Q9UL19 164 aa14.64□□□□□ -0.07
COL17A1-202ENST00000369733 HBE1P02100 147 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 HOXA9P31269 272 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 TAGLN2P37802 199 aaKnown RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 MMP15P51511 669 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 RBM39Q14498 530 aaKnown RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 PLCXD3Q63HM9 321 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SHISA6Q6ZSJ9 500 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 TMED6Q8WW62 240 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SDF2Q99470 211 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 GAS2L1Q99501 681 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 POMT2Q9UKY4 750 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 PCDHGA1Q9Y5H4 931 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 PPP1R2P9O14990 202 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 LILRB3O75022 631 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 THBS1P07996 1170 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 DCAF7P61962 342 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 ZP2Q05996 745 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SYS1Q8N2H4 156 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 APH1BQ8WW43 257 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 CPNE4Q96A23 557 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 ST6GAL2Q96JF0 529 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 ANKRD61A6NGH8 418 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 OR13C7P0DN81 318 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 MRPS34P82930 218 aaKnown RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 CLINT1Q14677 625 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 CDK5R1Q15078 307 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 TRMT12Q53H54 448 aaKnown RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 FAM74A1Q5RGS3 127 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 FAM27D1Q5T7N8 215 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 MED25Q71SY5 747 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 CLRN3Q8NCR9 226 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 OR14L1PQ8NHC6 308 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 RBMXL1Q96E39 390 aaKnown RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SDSLQ96GA7 329 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SAMD10Q9BYL1 202 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 KLF15Q9UIH9 416 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 K7ESM1 405 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SLC35E2P0CK97 266 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 POU3F3P20264 500 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 DCTDP32321 178 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 GLYR1Q49A26 553 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 FAM26DQ5JW98 314 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 C1QTNF12Q5T7M4 302 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 MRPL21Q7Z2W9 205 aaKnown RBP14.63□□□□□ -0.07
COL17A1-202ENST00000369733 SMIM4Q8WVI0 70 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 RNF170Q96K19 258 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 NIPSNAP3BQ9BS92 247 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 CYSLTR2Q9NS75 346 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 TAS2R5Q9NYW4 299 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 FBXO7Q9Y3I1 522 aa14.63□□□□□ -0.07
COL17A1-202ENST00000369733 MGMTP16455 207 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 HMGA1P17096 107 aaKnown RBP14.62□□□□□ -0.07
COL17A1-202ENST00000369733 ACHEP22303 614 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 ATP1B3P54709 279 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM88Q6PEY1 159 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 FJX1Q86VR8 437 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 OR52B4Q8NGK2 314 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 SGPP1Q9BX95 441 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM100Q9NV29 134 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 TK1P04183 234 aa14.62□□□□□ -0.07
COL17A1-202ENST00000369733 DEFB103AP81534 67 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms