RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 M0R082 166 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ADORA3P0DMS8 318 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 TFPIP10646 304 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ACVR2AP27037 513 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 GTF2E2P29084 291 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 RAB25P57735 213 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ERVK-25P63136 954 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.84□□□□□ -0.67
USF1-203ENST00000368021 FOXO1Q12778 655 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ZP4Q12836 540 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 MYBPHQ13203 477 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 MFAP5Q13361 173 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 CLVS2Q5SYC1 327 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SHEQ5VZ18 495 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 LINC00696Q6ZRV3 163 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 MEPCEQ7L2J0 689 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 POC5Q8NA72 575 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ADPRHL1Q8NDY3 354 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 BBS1Q8NFJ9 593 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 OR52E2Q8NGJ4 325 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ZNF417Q8TAU3 575 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 LGALS12Q96DT0 336 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 MAP6Q96JE9 813 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 OPALINQ96PE5 141 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SIGLEC12Q96PQ1 595 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 UBL7Q96S82 380 aaPredicted RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 DDOQ99489 341 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 NIPAL2Q9H841 368 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 KLHL1Q9NR64 748 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ACOXLQ9NUZ1 547 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 WARS2Q9UGM6 360 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 TRAPPC4Q9Y296 219 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 B3GALT5Q9Y2C3 310 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 CFAP46Q8IYW2 2715 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 OR2M5A3KFT3 312 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 NPIPB13A6NJU9 1138 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 ZNF99A8MXY4 864 aaPredicted RBP10.83□□□□□ -0.68
USF1-203ENST00000368021 NPIPB4C9JG80 1138 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 OR6A2O95222 327 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 RAB36O95755 333 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 IGHMP01871 453 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 F13BP05160 661 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 SLC2A5P22732 501 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 MAP2K4P45985 399 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 PUDPQ08623 228 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 OR7A5Q15622 319 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 RAET1LQ5VY80 246 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 H1FNTQ75WM6 255 aaPredicted RBP10.83□□□□□ -0.68
USF1-203ENST00000368021 FAM98AQ8NCA5 519 aaKnown RBP10.83□□□□□ -0.68
USF1-203ENST00000368021 NPEPL1Q8NDH3 523 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 MDS2Q8NDY4 140 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 OR2M7Q8NG81 312 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 OR52I1Q8NGK6 324 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 OR4K13Q8NH42 304 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 SLC39A7Q92504 469 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 HAS2Q92819 552 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 ZNF552Q9H707 407 aaPredicted RBP10.83□□□□□ -0.68
USF1-203ENST00000368021 DCAF16Q9NXF7 216 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 HAO2Q9NYQ3 351 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 GRHPRQ9UBQ7 328 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 SEC14L4Q9UDX3 406 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 EXOGQ9Y2C4 368 aaKnown RBP10.83□□□□□ -0.68
USF1-203ENST00000368021 ALPK2Q86TB3 2170 aa10.83□□□□□ -0.68
USF1-203ENST00000368021 MED12Q93074 2177 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 FREM3P0C091 2139 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 TEX13CA0A0J9YWL9 993 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 K7EM74 188 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 RNF13O43567 381 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 INMTO95050 263 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 ECDO95905 644 aaPredicted RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 F10P00742 488 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 IL7P13232 177 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 GP2P55259 537 aaKnown RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 GPR85P60893 370 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 RAC1P63000 192 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 FOXK1P85037 733 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 SOWAHCQ53LP3 525 aaPredicted RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 ATAD3CQ5T2N8 411 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 CCBE1Q6UXH8 406 aaPredicted RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 NOXA1Q86UR1 476 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 UBQLNLQ8IYU4 475 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 CYB561A3Q8NBI2 242 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 SDR9C7Q8NEX9 313 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 ATP6V1C2Q8NEY4 427 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 OR5M1Q8NGP8 315 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 OR5H6Q8NGV6 325 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 KISS1RQ969F8 398 aaPredicted RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 MIB2Q96AX9 1013 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 OTULINQ96BN8 352 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 RASD2Q96D21 266 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 Q96M85 177 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 TSPAN32Q96QS1 320 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 TEAD3Q99594 435 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 JAM3Q9BX67 310 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 HCAR1Q9BXC0 346 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 NMNAT2Q9BZQ4 307 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms