RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ZNF587BE7ETH6 402 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 FZD6O60353 706 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 POLR2IP36954 125 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ACSM1Q08AH1 577 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 MDGA2Q7Z553 956 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ASB16Q96NS5 453 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 PTPRFP10586 1907 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 IGLV3-16A0A075B6K0 115 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 TMED7-TICAM2A0A0A6YYA0 188 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 CNR1P21554 472 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ADPRHP54922 357 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 MFAP5Q13361 173 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 OPCMLQ14982 345 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 THEM4Q5T1C6 240 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF416Q9BWM5 594 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 FGF20Q9NP95 211 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 TMED7Q9Y3B3 224 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 GREB1Q4ZG55 1949 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 C17orf112F2Z3M2 114 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF385DQ9H6B1 395 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 RPS10P5Q9NQ39 176 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC25A37Q9NYZ2 338 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC6A11P48066 632 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 SCAND1P57086 179 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 WDPCPO95876 746 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC16A14Q7RTX9 510 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 NMNAT2Q9BZQ4 307 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 PPIL1Q9Y3C6 166 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 AGAP14A8MT82 685 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 PYCR3Q53H96 274 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 TMEM255BQ8WV15 326 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF681Q96N22 645 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ACACAQ13085 2346 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 KDM4EB2RXH2 506 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DFFBO76075 338 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SDHAP31040 664 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SDF2Q99470 211 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DNAJB11Q9UBS4 358 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 EMC9Q9Y3B6 208 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 RHBDD3Q9Y3P4 386 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DBPQ10586 325 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DOK3Q7L591 496 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 TAAR8Q969N4 342 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 REV1Q9UBZ9 1251 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SNRPBP14678 240 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 GABRR1P24046 479 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 ARG2P78540 354 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CAMK2BQ13554 666 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 TMEM176BQ3YBM2 270 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CALHM3Q86XJ0 350 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF321PQ8N8H1 164 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DTX3Q8N9I9 347 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 PRMT8Q9NR22 394 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 IMPA2O14732 288 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DIO1P49895 249 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SUMO3P55854 103 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 UCN3Q969E3 161 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 NMNAT3Q96T66 252 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 NIPSNAP3BQ9BS92 247 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 GSX2Q9BZM3 304 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 MYLKQ15746 1914 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 COL11A2P13942 1736 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 HSBP1L1C9JCN9 74 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 TSPAN12O95859 305 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 RPL27P61353 136 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 TAGLNQ01995 201 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF92Q03936 586 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 ANKRD9Q96BM1 317 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 PCED1AQ9H1Q7 454 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC17A5Q9NRA2 495 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 ACAD8Q9UKU7 415 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 ACOD1A6NK06 481 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CHRM4P08173 479 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CD79AP11912 226 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 RPS19P39019 145 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SCARB1Q8WTV0 552 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 TEAD3Q99594 435 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CYB5R1Q9UHQ9 305 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SHOXO15266 292 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 F13BP05160 661 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 Q6ZTK2 550 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CSF3RQ99062 836 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 LAT2Q9GZY6 243 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 A0A087WZY1 265 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 LCMT2O60294 686 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 FBXO45P0C2W1 286 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 RAG2P55895 527 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 USP51Q70EK9 711 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 PRR22Q8IZ63 422 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 SPPL3Q8TCT6 385 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 MRPS28Q9Y2Q9 187 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 A0A0U1RQS6 177 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 A0A1B0GTW7 788 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 CHRNB1P11230 501 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 DEFB133Q30KQ1 61 aa11.07□□□□□ -0.64
CDC42BPA-203ENST00000366766 GLYATL3Q5SZD4 288 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms