RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 BCORL1Q5H9F3 1711 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 GABRPO00591 440 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 ELK1P19419 428 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 VEZF1Q14119 521 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 MED25Q71SY5 747 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 GAREM2Q75VX8 874 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 LGI3Q8N145 548 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 SIRT6Q8N6T7 355 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 OR2M3Q8NG83 312 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 MED20Q9H944 212 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 NUMBLQ9Y6R0 609 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 IGKV6D-41A0A0C4DH26 115 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 DNASE2O00115 360 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-201ENST00000358694 OR7C2O60412 319 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 ATXN1LP0C7T5 689 aaKnown RBP8.2□□□□□ -1.1
CTNND1-201ENST00000358694 CDC34P49427 236 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-201ENST00000358694 SYPL1Q16563 259 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 NXNL2Q5VZ03 156 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 PM20D1Q6GTS8 502 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 PRR27Q6MZM9 219 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 MDGA2Q7Z553 956 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 GJC3Q8NFK1 279 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 SEMA6DQ8NFY4 1073 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 OR2G3Q8NGZ4 309 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 KHSRPQ92945 711 aaKnown RBP eCLIP8.2□□□□□ -1.14e-7■■□□□ 12.3
CTNND1-201ENST00000358694 GAL3ST2Q9H3Q3 398 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 METTL17Q9H7H0 456 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-201ENST00000358694 WASH6PQ9NQA3 447 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 ACOXLQ9NUZ1 547 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 MUTYHQ9UIF7 546 aa8.2□□□□□ -1.1
CTNND1-201ENST00000358694 AIFM1O95831 613 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 HSD17B1P14061 328 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 GPR19Q15760 415 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 PIWIL3Q7Z3Z3 882 aaKnown RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 TCTE3Q8IZS6 198 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 CBARPQ8N350 705 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 YIPF5Q969M3 257 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ADIPOR1Q96A54 375 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 OSGIN1Q9UJX0 560 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ZNF623O75123 536 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 SLC10A3P09131 477 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 SDC1P18827 310 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 OR10A3P58181 314 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 YPEL5P62699 121 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 TNFRSF17Q02223 184 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 HIST2H3AQ71DI3 136 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ISCA2Q86U28 154 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 GABRG1Q8N1C3 465 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 INSM2Q96T92 566 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ONECUT1Q9UBC0 465 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 BCL9LQ86UU0 1499 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ITSN1Q15811 1721 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 USP32Q8NFA0 1604 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 MEIOCA2RUB1 952 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 MYADML2A6NDP7 307 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 H7BYZ3 331 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 NRG2O14511 850 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ECI1P42126 302 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 SLC10A2Q12908 348 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ANKRD16Q6P6B7 361 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 GLIPR1L1Q6UWM5 242 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 RNF141Q8WVD5 230 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 TMIGD2Q96BF3 282 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 PSD2Q9BQI7 771 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 C16orf70Q9BSU1 422 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 NARFLQ9H6Q4 476 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 CHST11Q9NPF2 352 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 SEMA4GQ9NTN9 838 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 VAPAQ9P0L0 249 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 SLCO1B1Q9Y6L6 691 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 MKRN2OSH3BPM6 223 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ARHGAP33O14559 1287 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 PPP1R2P9O14990 202 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ALOX12BO75342 701 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 AREGP15514 252 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 NPY4RP50391 375 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 CTSCP53634 463 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 PPIAP62937 165 aaKnown RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 OR10K2Q6IF99 312 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 MARCH3Q86UD3 253 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 PHOSPHO2Q8TCD6 241 aa8.19□□□□□ -1.1
CTNND1-201ENST00000358694 ZNF486Q96H40 463 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 NDRG4Q9ULP0 352 aaKnown RBP8.19□□□□□ -1.1
CTNND1-201ENST00000358694 MEIKINA0A087WXM9 373 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 M0QYG6 137 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 SMAD6O43541 496 aaKnown RBP8.18□□□□□ -1.1
CTNND1-201ENST00000358694 C1orf105O95561 183 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 ONECUT2O95948 504 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 NAGAP17050 411 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 HOXC13P31276 330 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 EIF2DP41214 584 aaKnown RBP8.18□□□□□ -1.1
CTNND1-201ENST00000358694 SYT6Q5T7P8 510 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-201ENST00000358694 FAM43BQ6ZT52 329 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-201ENST00000358694 MOB3BQ86TA1 216 aa8.18□□□□□ -1.1
CTNND1-201ENST00000358694 YRDCQ86U90 279 aaKnown RBP8.18□□□□□ -1.1
CTNND1-201ENST00000358694 TTC9BQ8N6N2 239 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms