RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SUSD5O60279 629 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 NFATC1O95644 943 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CTSLP07711 333 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 MMP7P09237 267 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR2T7P0C7T2 308 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SULT1A3P0DMM9 295 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SULT1A4P0DMN0 295 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 HBG1P69891 147 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 HBG2P69892 147 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 LCTLQ6UWM7 567 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF439Q8NDP4 499 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR4K14Q8NGD5 310 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR2T27Q8NH04 317 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SLC22A18Q96BI1 424 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM68Q96MH6 324 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CMTM3Q96MX0 182 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FAM103A1Q9BTL3 118 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 C1QTNF3Q9BXJ4 246 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 MTIF3Q9H2K0 278 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PLEKHJ1Q9NW61 149 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 KLHL42Q9P2K6 505 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 G3V3Q6 166 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 AOAHP28039 575 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SNU13P55769 128 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 POLR2GP62487 172 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SOX4Q06945 474 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 IRF3Q14653 427 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SLC25A35Q3KQZ1 300 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ADIPOR2Q86V24 386 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SENP5Q96HI0 755 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 WWTR1Q9GZV5 400 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 MBTPS2O43462 519 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 B3GALT4O96024 378 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SRMP19623 302 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ACTR1BP42025 376 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FABP6P51161 128 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FOXO1Q12778 655 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 DEFB134Q4QY38 66 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ABLIM2Q6H8Q1 611 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 MCATQ8IVS2 390 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 WFIKKN2Q8TEU8 576 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ASB11Q8WXH4 323 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM106AQ96A25 262 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TRBV23OR9-2A0A075B6M9 112 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PQLC2LA1A4F0 135 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PIRO00625 290 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 DPM1O60762 260 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 NDUFB6O95139 128 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SBK3P0C264 359 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RAB11AP62491 216 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR1Q1Q15612 314 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FUT10Q6P4F1 479 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TIPARPQ7Z3E1 657 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ZC3HAV1LQ96H79 300 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 NOL4LQ96MY1 436 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CERS4Q9HA82 394 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 LRP6O75581 1613 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MMP11P24347 488 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GLO1Q04760 184 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 NCMAPQ5T1S8 102 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GDF7Q7Z4P5 450 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 HGDQ93099 445 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 BORCS7Q96B45 105 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TMPRSS13Q9BYE2 586 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CTSFQ9UBX1 484 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SUSD2Q9UGT4 822 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CST2P09228 141 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 VWA2Q5GFL6 755 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 Q6ZVL8 140 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SLC24A5Q71RS6 500 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR6N1Q8NGY5 312 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 DTD1Q8TEA8 209 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 KLK6Q92876 244 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TAAR9Q96RI9 348 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SLC2A9Q9NRM0 540 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TM7SF3Q9NS93 570 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 XKRY2A2RUG3 117 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 A6NLC8 198 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 M0QZK8 103 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 DSCR3O14972 297 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 B4GALT2O60909 372 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GGCTO75223 188 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 IGF2P01344 180 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PTTG1IPP53801 180 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PDLIM5Q96HC4 596 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF426Q9BUY5 554 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR1A2Q9Y585 309 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MPTX1A8MV57 137 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PMP2P02689 132 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GYPBP06028 91 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MGST1P10620 155 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 RNH1P13489 461 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CASRP41180 1078 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MARVELD1Q9BSK0 173 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 B3GALT5Q9Y2C3 310 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PYCARD-AS1I3L0S3 204 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SOCS5O75159 536 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 FBP1P09467 338 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SLC6A1P30531 599 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms