RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ULBP3Q9BZM4 244 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 B3GAT1Q9P2W7 334 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 OR52A1Q9UKL2 312 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 GOLGB1Q14789 3259 aaKnown RBP10.81□□□□□ -0.68
COL9A1-202ENST00000357250 A0A087WUU8 490 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 A6NIN4 97 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF814B7Z6K7 855 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF749O43361 778 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 NCR1O76036 304 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 MSR1P21757 451 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 EPHA5P54756 1037 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CAV3P56539 151 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 RBMS3Q6XE24 437 aaKnown RBP10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF620Q6ZNG0 422 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 SIAH3Q8IW03 269 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 PRSS35Q8N3Z0 413 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 UCN3Q969E3 161 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 SSX3Q99909 188 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ACKR4Q9NPB9 350 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 NDUFB11Q9NX14 153 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 KCND3Q9UK17 655 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 TBX21Q9UL17 535 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 C17orf112F2Z3M2 114 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 HMGN4O00479 90 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 NSA2O95478 260 aaKnown RBP10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CPEP16870 476 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
COL9A1-202ENST00000357250 FAPQ12884 760 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF266Q14584 549 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF674Q2M3X9 581 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 MDGA2Q7Z553 956 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 GRAMD2AQ8IUY3 354 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ESX1Q8N693 406 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 HLA-CQ95604 372 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CEBPZOSA8MTT3 80 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 FZD6O60353 706 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 ALOX12BO75342 701 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 IL32P24001 234 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 RFX2P48378 723 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 RAB4BP61018 213 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 RPS18P62269 152 aaKnown RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 TLE4Q04727 773 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 DUSP5Q16690 384 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 UBL7Q96S82 380 aaPredicted RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 OBP2BQ9NPH6 170 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 NOSIPQ9Y314 301 aaKnown RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 TRIP11Q15643 1979 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 CD22P20273 847 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 S100A11P31949 105 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 CCR2P41597 374 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 PLGLAQ15195 96 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 OR1E3Q8WZA6 343 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 SPACA1Q9HBV2 294 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 A0A1B0GVG6 124 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 TRIM64BA6NI03 449 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 CXCL10P02778 98 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 MRPL19P49406 292 aaKnown RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 MAP2K6P52564 334 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 ADPRHP54922 357 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 KCNIP4Q6PIL6 250 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 ESPNLQ6ZVH7 1005 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 DOK3Q7L591 496 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 BPHLQ86WA6 291 aaPredicted RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 TMEM178AQ8NBL3 297 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 IL1F10Q8WWZ1 152 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 FGF22Q9HCT0 170 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 PISDQ9UG56 409 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 MMP17Q9ULZ9 603 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 A0A1B0GV50 99 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 TCRBV5S2A0A599 114 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 NUDT19A8MXV4 375 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 H0YIG0 161 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 YY2O15391 372 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 FABP7O15540 132 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF728P0DKX0 622 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 F2RL1P55085 397 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 GPR85P60893 370 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 SHHQ15465 462 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 PDLIM3Q53GG5 364 aaPredicted RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 OR5M10Q6IEU7 315 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 OR4N2Q8NGD1 307 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 OR51A2Q8NGJ7 313 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 SLC37A2Q8TED4 501 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 ANKRD9Q96BM1 317 aaPredicted RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 RBMXL1Q96E39 390 aaKnown RBP10.8□□□□□ -0.68
COL9A1-202ENST00000357250 CSF3RQ99062 836 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 SELENOIQ9C0D9 397 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 PADI1Q9ULC6 663 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
COL9A1-202ENST00000357250 C4orf47A7E2U8 309 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 LALBAP00709 142 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 PPICP45877 212 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 HTD2P86397 168 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 SLC9A3R2Q15599 337 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 TMEM240Q5SV17 173 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 CYHR1Q6ZMK1 362 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 RNF165Q6ZSG1 346 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms