RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TAS2R45P59539 299 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 UBE2G1P62253 170 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 TLE1Q04724 770 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 EBPQ15125 230 aaKnown RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 MEP1BQ16820 701 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 RTL8BQ17RB0 113 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 TANGO2Q6ICL3 276 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 ZNF836Q6ZNA1 936 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 DBX2Q6ZNG2 339 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 GDF7Q7Z4P5 450 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 DNAJC5GQ8N7S2 189 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 TMIGD2Q96BF3 282 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 TM4SF18Q96CE8 201 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 OR2A14Q96R47 310 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 FGF21Q9NSA1 209 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 RBFOX1Q9NWB1 397 aaKnown RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 UGT2A1Q9Y4X1 527 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 VIRMAQ69YN4 1812 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 TRDV1A0A1B0GX56 115 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 TARM1B6A8C7 271 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 ATP6V1G2-DDX39BF2Z307 99 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 DVL1O14640 695 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 TAAR5O14804 337 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 CT45A10P0DMU9 189 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 SNRPBP14678 240 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 PRKACAP17612 351 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 DVL1P1P54792 670 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 ELAVL1Q15717 326 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 ZNF628Q5EBL2 1059 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 PTCRAQ6ISU1 281 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 LHFPL2Q6ZUX7 228 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 TAS1R1Q7RTX1 841 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 C1orf87Q8N0U7 546 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 OR2T11Q8NH01 316 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 FAM3DQ96BQ1 224 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 MBOAT4Q96T53 435 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 CSF3RQ99062 836 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 NDFIP1Q9BT67 221 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 FAM234AQ9H0X4 552 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 RIMS4Q9H426 269 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 GALNT9Q9HCQ5 603 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 GMPR2Q9P2T1 348 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 PURGQ9UJV8 347 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 COPS3Q9UNS2 423 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 GPR55Q9Y2T6 319 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 ACOD1A6NK06 481 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 PRRG2O14669 202 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 NSA2O95478 260 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 PTAFRP25105 342 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 F2RP25116 425 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 RPL27P61353 136 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 SNRPGP62308 76 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 OR8G1Q15617 311 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 SOHLH1Q5JUK2 328 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 MFSD12Q6NUT3 480 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 PIWIL3Q7Z3Z3 882 aaKnown RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 ADGRG3Q86Y34 549 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 PXT1Q8NFP0 134 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 M1APQ8TC57 530 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 C3orf30Q96M34 536 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 ZBP1Q9H171 429 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 CDCP1Q9H5V8 836 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 USP22Q9UPT9 525 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 KLF13Q9Y2Y9 288 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 PUS1Q9Y606 427 aaKnown RBP eCLIP5.96□□□□□ -1.46
UPF2-201ENST00000356352 IMPA2O14732 288 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 HSD17B6O14756 317 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 NCR1O76036 304 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 SLCO2B1O94956 709 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 SOD1P00441 154 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 DUSP1P28562 367 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 DAPP51397 102 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 CCL11P51671 97 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 FLI1Q01543 452 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 IHHQ14623 411 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 TRIM61Q5EBN2 209 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 FCRL6Q6DN72 434 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 TFAP2EQ6VUC0 442 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 RLN3Q8WXF3 142 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 CRYGNQ8WXF5 182 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 GATA6Q92908 595 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 ELSPBP1Q96BH3 223 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 NMNAT3Q96T66 252 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 ZNF331Q9NQX6 463 aaPredicted RBP5.96□□□□□ -1.46
UPF2-201ENST00000356352 DUSP13Q9UII6 198 aa5.96□□□□□ -1.46
UPF2-201ENST00000356352 SGCEO43556 437 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 CSF3P09919 207 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ADRA2CP18825 462 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 BPIFB3P59826 476 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 PMPCAQ10713 525 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SPCS2Q15005 226 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 AVPI1Q5T686 147 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 OR2G6Q5TZ20 316 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 DHRS4L2Q6PKH6 230 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ALKAL1Q6UXT8 129 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 LINC00696Q6ZRV3 163 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 LMNTD1Q8N9Z9 388 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 C20orf85Q9H1P6 137 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms