RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GDF6Q6KF10 455 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 TMED4Q7Z7H5 227 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 NEIL2Q969S2 332 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 SMIM19Q96E16 107 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 PACRGQ96M98 296 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 CWH43Q9H720 699 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 MED20Q9H944 212 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 FBXO4Q9UKT5 387 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 NOP16Q9Y3C1 178 aaKnown RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 TIMM13Q9Y5L4 95 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 TRBV6-7A0A0A0MS04 114 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 DCTN6O00399 190 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 EPPINO95925 133 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 SERPINA5P05154 406 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 CTSLP07711 333 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 PRAMEF17Q5VTA0 474 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 GRHL2Q6ISB3 625 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 FAM151BQ6UXP7 276 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 RABEPKQ7Z6M1 372 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 TMEM86AQ8N2M4 240 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 HPSE2Q8WWQ2 592 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 PHYHIPQ92561 330 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 FOXRED1Q96CU9 486 aaPredicted RBP14.35□□□□□ -0.11
RTN3-205ENST00000356000 PTCHD1Q96NR3 888 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 RAB33BQ9H082 229 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 ATG10Q9H0Y0 220 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 SGK2Q9HBY8 427 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 SLC23A2Q9UGH3 650 aa14.35□□□□□ -0.11
RTN3-205ENST00000356000 SMCO3A2RU48 225 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 TMEM210A6NLX4 147 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 IL18BPO95998 194 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 CKBP12277 381 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 ITPKBP27987 946 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 CCL14Q16627 93 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 ZNF620Q6ZNG0 422 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 TAF8Q7Z7C8 310 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 SLC25A21Q9BQT8 299 aaPredicted RBP14.34□□□□□ -0.11
RTN3-205ENST00000356000 SLC17A9Q9BYT1 436 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 SPACA1Q9HBV2 294 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 MARCH5Q9NX47 278 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 FOXE1O00358 373 aaPredicted RBP14.34□□□□□ -0.11
RTN3-205ENST00000356000 DVL1O14640 695 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 PIN1P1O15428 100 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 PRICKLE3O43900 615 aaPredicted RBP14.34□□□□□ -0.11
RTN3-205ENST00000356000 CD3DP04234 171 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 C8GP07360 202 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 TMIGD3P0DMS9 266 aaPredicted RBP14.34□□□□□ -0.11
RTN3-205ENST00000356000 AKR1A1P14550 325 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 CDK5R1Q15078 307 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 UBE2V2Q15819 145 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 FAM71E1Q6IPT2 247 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 UBE3DQ7Z6J8 389 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 FJX1Q86VR8 437 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 TERB2Q8NHR7 220 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 NOX4Q9NPH5 578 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 PARP11Q9NR21 331 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 ETV7Q9Y603 341 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 MTCH2Q9Y6C9 303 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 V9GY05 133 aa14.34□□□□□ -0.11
RTN3-205ENST00000356000 HMGN4O00479 90 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 IGSF6O95976 241 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 HOXD9P28356 352 aaPredicted RBP14.33□□□□□ -0.11
RTN3-205ENST00000356000 NKX6-1P78426 367 aaPredicted RBP14.33□□□□□ -0.11
RTN3-205ENST00000356000 AKR1C8PQ5T2L2 129 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 TTLL10Q6ZVT0 673 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 CHST13Q8NET6 341 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 OR13C8Q8NGS7 320 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 OR9A4Q8NGU2 314 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 LYPD6BQ8NI32 183 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 ZBTB8AQ96BR9 441 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 ASB8Q9H765 288 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 ICKQ9UPZ9 632 aa14.33□□□□□ -0.11
RTN3-205ENST00000356000 KIF26AQ9ULI4 1882 aaPredicted RBP14.33□□□□□ -0.12
RTN3-205ENST00000356000 LDLRAD4O15165 306 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 GBAP04062 536 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 GZMBP10144 247 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 ACRV1P26436 265 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 SLC9A5Q14940 896 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 ZNF674Q2M3X9 581 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 DMRTA1Q5VZB9 504 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 AWAT2Q6E213 333 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 STEAP1BQ6NZ63 245 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 THNSL2Q86YJ6 484 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 ZNF433Q8N7K0 673 aaPredicted RBP14.33□□□□□ -0.12
RTN3-205ENST00000356000 C16orf78Q8WTQ4 265 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 DCUN1D4Q92564 292 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 MUCL1Q96DR8 90 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 SEPT5Q99719 369 aaPredicted RBP14.33□□□□□ -0.12
RTN3-205ENST00000356000 HCAR1Q9BXC0 346 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 MYNNQ9NPC7 610 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 STARD10Q9Y365 291 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 CSAG2Q9Y5P2 127 aa14.33□□□□□ -0.12
RTN3-205ENST00000356000 TMEM269A0A1B0GVZ9 245 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 RTCAO00442 366 aaKnown RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 PSMB6P28072 239 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 GPR3P46089 330 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 CSNK1DP48730 415 aa14.32□□□□□ -0.12
RTN3-205ENST00000356000 PPM1FP49593 454 aaPredicted RBP14.32□□□□□ -0.12
RTN3-205ENST00000356000 SULT1A2P50226 295 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms