RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PPP2R2BQ00005 443 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 LOXL1Q08397 574 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 ARMC4Q5T2S8 1044 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SPATA21Q7Z572 469 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 IGFN1Q86VF2 1251 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SLC22A24Q8N4F4 322 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 LRRC75AQ8NAA5 344 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SYT14Q8NB59 555 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 NOXO1Q8NFA2 376 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 OR4F15Q8NGB8 312 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 LIPHQ8WWY8 451 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 ZNF566Q969W8 418 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 PRRC1Q96M27 445 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 FOXN4Q96NZ1 517 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 TNFRSF13CQ96RJ3 184 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 ELAC2Q9BQ52 826 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 B3GAT2Q9NPZ5 323 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 FZR1Q9UM11 496 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 UGT2A1Q9Y4X1 527 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 PMF1-BGLAPU3KQ54 211 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 JMJD1CQ15652 2540 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 IGHV4-61A0A0C4DH41 118 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 LYNX1G3V0Z9 82 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 CXCR6O00574 342 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 BCL10O95999 233 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 IGHV4-31P0DP07 118 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 LYNX1P0DP58 116 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 ZNF16P17020 682 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 ZNF26P17031 533 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 NPR2P20594 1047 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 NR4A1P22736 598 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 RBM34P42696 430 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 GYS2P54840 703 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 ERVS71-1P61550 626 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 DAG1Q14118 895 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 FXNQ16595 210 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 C6orf52Q5T4I8 152 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 TBPL2Q6SJ96 375 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 OR4K5Q8NGD3 323 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 DNHD1Q96M86 4753 aa14.41□□□□□ -0.1
PDLIM7-201ENST00000355572 IFI30P13284 250 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 ACADSP16219 412 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 CDAP32320 146 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 PPOXP50336 477 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 VLDLRP98155 873 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 MAD2L1BPQ15013 274 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 TMEM255AQ5JRV8 349 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 CBLL1Q75N03 491 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 CCDC36Q8IYA8 594 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 FAM86B1Q8N7N1 296 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 ARIH2OSQ8N7S6 290 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 HSH2DQ96JZ2 352 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 SYT3Q9BQG1 590 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 POLR2J2Q9GZM3 115 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 POLR2J3Q9H1A7 115 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 TPK1Q9H3S4 243 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 INIPQ9NRY2 104 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 MED31Q9Y3C7 131 aa14.4□□□□□ -0.1
PDLIM7-201ENST00000355572 TRAV27A0A087WT01 109 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 CDC42EP2O14613 210 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 IGF2P01344 180 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 HIST1H2ABP04908 130 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 MMP7P09237 267 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 SLC25A16P16260 332 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 DRD4P21917 467 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 PAX7P23759 505 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 NUDT2P50583 147 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 ZNF133P52736 654 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 DSCR9P59020 149 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 TOP3AQ13472 1001 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 GGTLC2Q14390 218 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 CARTPTQ16568 116 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 HSP90B2PQ58FF3 399 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 HIST3H2AQ7L7L0 130 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 PIWIL3Q7Z3Z3 882 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 NRMQ8IXM6 262 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 OR13C2Q8NGS9 318 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 HIST1H2ACQ93077 130 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 MRPL24Q96A35 216 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 NABP1Q96AH0 204 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 BPESC1Q9GZL8 116 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 OR51B6Q9H340 312 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 MRGBPQ9NV56 204 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 ABCD2Q9UBJ2 740 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 HIF3AQ9Y2N7 669 aa14.39□□□□□ -0.11
PDLIM7-201ENST00000355572 A0A087WUU8 490 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 MGRN1O60291 552 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 UBL3O95164 117 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 ZNF682O95780 498 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 SERPINA1P01009 418 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 IGHG1P01857 330 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 ADRA2AP08913 450 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 THRBP10828 461 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 TCN1P20061 433 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 IL2RGP31785 369 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 ALDH3B1P43353 468 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 NR4A2P43354 598 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 PDLIM4P50479 330 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 CLRN1P58418 232 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 OFCC1Q8IZS5 231 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms