RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FBXL4Q9UKA2 621 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 GSTK1Q9Y2Q3 226 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 UGT2A1Q9Y4X1 527 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 NPFFR2Q9Y5X5 522 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 CHD3Q12873 2000 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.36□□□□□ -1.23
CD44-205ENST00000352818 LOC102723996A0A087X1L8 192 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 IGLV3-32A0A0A0MS00 114 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 DAPL1A0PJW8 107 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ISPDA4D126 451 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 LOC110117498-PIK3R3F6TDL0 507 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 WWP2O00308 870 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ETV2O00321 342 aaPredicted RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 GNB5O14775 395 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 HCRTR2O43614 444 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 FZD7O75084 574 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 NPIPB7O75200 414 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 SNX4O95219 450 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 LALBAP00709 142 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 BGLAPP02818 100 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 MT-ND5P03915 603 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 RAF1P04049 648 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 OR2T7P0C7T2 308 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 HIST1H1CP16403 213 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 TACR3P29371 465 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 SDHAP31040 664 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 CD79BP40259 229 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 HTR3AP46098 478 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 TMED10P49755 219 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 CCR4P51679 360 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 POLR2HP52434 150 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 ACTA2P62736 377 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ACTG2P63267 376 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 NKX6-1P78426 367 aaPredicted RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 HSF2Q03933 536 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 RBPJQ06330 500 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 MFAP5Q13361 173 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ZNF181Q2M3W8 571 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ZNF791Q3KP31 576 aaPredicted RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 KLHL12Q53G59 568 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 GPR139Q6DWJ6 353 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 VASNQ6EMK4 673 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 DCDC5Q6ZRR9 648 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 CPEB2Q7Z5Q1 589 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 MARCH3Q86UD3 253 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 LHFPL3Q86UP9 236 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 CXorf67Q86X51 503 aaPredicted RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 PRR22Q8IZ63 422 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 FAM98AQ8NCA5 519 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 NPEPL1Q8NDH3 523 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 SDR9C7Q8NEX9 313 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 OR5L2Q8NGL0 311 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 OR2T27Q8NH04 317 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 LILRB4Q8NHJ6 448 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 B4GALNT2Q8NHY0 566 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ZNF563Q8TA94 476 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 HAVCR2Q8TDQ0 301 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 GPR119Q8TDV5 335 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 ST8SIA1Q92185 356 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 HGDQ93099 445 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 TMCO6Q96DC7 493 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 CNN2Q99439 309 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 LPAR4Q99677 370 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 MESP1Q9BRJ9 268 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 CCDC32Q9BV29 185 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 MROQ9BYG7 248 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 BARHL1Q9BZE3 327 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 RTN4RQ9BZR6 473 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 C6orf62Q9GZU0 229 aaPredicted RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 OR51V1Q9H2C8 321 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 NANSQ9NR45 359 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 BABAM2Q9NXR7 383 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 TAS2R10Q9NYW0 307 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 MOKQ9UQ07 419 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 TRAPPC4Q9Y296 219 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 PTRH2Q9Y3E5 179 aaKnown RBP7.36□□□□□ -1.23
CD44-205ENST00000352818 IER3IP1Q9Y5U9 82 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 CPAMD8Q8IZJ3 1885 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 TENM1Q9UKZ4 2725 aa7.36□□□□□ -1.23
CD44-205ENST00000352818 A0A1W2PQ72 361 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 ZC3H12DA2A288 527 aaKnown RBP7.35□□□□□ -1.23
CD44-205ENST00000352818 E9PLN8 166 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 GABRPO00591 440 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 RNF13O43567 381 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 PLPP2O43688 288 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 PRKNO60260 465 aaPredicted RBP7.35□□□□□ -1.23
CD44-205ENST00000352818 UPK1BO75841 260 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 RGS9O75916 674 aaPredicted RBP7.35□□□□□ -1.23
CD44-205ENST00000352818 GLCEO94923 617 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 IGHEP01854 428 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 IGHMP01871 453 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 CFL1P23528 166 aaKnown RBP7.35□□□□□ -1.23
CD44-205ENST00000352818 CXCR1P25024 350 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 RPL4P36578 427 aaKnown RBP7.35□□□□□ -1.23
CD44-205ENST00000352818 MTNR1BP49286 362 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 DIO1P49895 249 aa7.35□□□□□ -1.23
CD44-205ENST00000352818 MAP2K6P52564 334 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms