RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-201ENST00000349062 OR10G3Q8NGC4 313 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 OR51A4Q8NGJ6 313 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 ANGPTL6Q8NI99 470 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
TRIM4-201ENST00000349062 NIPAL2Q9H841 368 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 FITM1A5D6W6 292 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 FLRT2O43155 660 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 ZFPL1O95159 310 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 CXCL3P19876 107 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 SLC2A5P22732 501 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 FGF9P31371 208 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-201ENST00000349062 ADH7P40394 386 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 EPHA4P54764 986 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 DCDP81605 110 aaKnown RBP12.57□□□□□ -0.4
TRIM4-201ENST00000349062 POU3F1Q03052 451 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-201ENST00000349062 NTRK2Q16620 822 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 GLRX5Q86SX6 157 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 ASPMQ8IZT6 3477 aa12.57□□□□□ -0.4
TRIM4-201ENST00000349062 OR2T7P0C7T2 308 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ATF1P18846 271 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ACTC1P68032 377 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ACTA1P68133 377 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 GFOD2Q3B7J2 385 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 COX15Q7KZN9 410 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 OR2T27Q8NH04 317 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 THAP7Q9BT49 309 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-201ENST00000349062 TMEM43Q9BTV4 400 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 DEFB126Q9BYW3 111 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 KCNK15Q9H427 330 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 SEC61A2Q9H9S3 476 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 BAIAP2Q9UQB8 552 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 SLC22A13Q9Y226 551 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 PTRH2Q9Y3E5 179 aaKnown RBP12.56□□□□□ -0.4
TRIM4-201ENST00000349062 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 IGKV3D-11A0A0A0MRZ8 115 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 EVX1P49640 407 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 CCR6P51684 374 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 RPS18P62269 152 aaKnown RBP12.56□□□□□ -0.4
TRIM4-201ENST00000349062 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ZBTB37Q5TC79 503 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 LINGO2Q7L985 606 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF440Q8IYI8 595 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF578Q96N58 590 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-201ENST00000349062 HRH3Q9Y5N1 445 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 MEIS3P1A6NDR6 274 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 J3QRE1 110 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF593O00488 134 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ADRB1P08588 477 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 GIFP27352 417 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 SDHAP31040 664 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ADAM8P78325 824 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ACY1Q03154 408 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 CBFBQ13951 182 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 C1orf140Q5VVS0 124 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 LINC00114Q6XXX2 140 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 CMIPQ8IY22 773 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 ICAM5Q9UMF0 924 aa12.56□□□□□ -0.4
TRIM4-201ENST00000349062 STOMP27105 288 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 CLDN20P56880 219 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 CDK5R1Q15078 307 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 SF3A2Q15428 464 aaKnown RBP12.55□□□□□ -0.4
TRIM4-201ENST00000349062 RNLSQ5VYX0 342 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 LRFN4Q6PJG9 635 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 ANKRD37Q7Z713 158 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 PGLYRP3Q96LB9 341 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 PPP4R1LQ9P1A2 415 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 DNAJC13O75165 2243 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 GLCEO94923 617 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-201ENST00000349062 C9orf62Q8N4C0 152 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF248Q8NDW4 579 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 RFT1Q96AA3 541 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 COL4A2P08572 1712 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 C10orf142B7Z368 130 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 H0YC42 278 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 H3BMH7 237 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 IFNGR1P15260 489 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 TNK1Q13470 666 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 SFRP4Q6FHJ7 346 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-201ENST00000349062 TEX261Q6UWH6 196 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 FCRLAQ7L513 359 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 TMPRSS12Q86WS5 348 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 ADGRG3Q86Y34 549 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 OR2T4Q8NH00 348 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 MVB12AQ96EY5 273 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 ABHD1Q96SE0 405 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 LAT2Q9GZY6 243 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 ELOVL3Q9HB03 270 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 TCF7L1Q9HCS4 588 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 COA3Q9Y2R0 106 aaPredicted RBP12.55□□□□□ -0.4
TRIM4-201ENST00000349062 POLR1DQ9Y2S0 133 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms