RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CLDN34H7C241 214 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MAXP61244 160 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CDK6Q00534 326 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CTBSQ01459 385 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CEACAM21Q3KPI0 293 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LRRC37A5PQ49AS3 106 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LCNL1Q6ZST4 164 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM156Q8N614 296 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 OR10W1Q8NGF6 305 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 OR2T27Q8NH04 317 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C5orf34Q96MH7 638 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C11orf68Q9H3H3 251 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RDH14Q9HBH5 336 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC25A19Q9HC21 320 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 OPN4Q9UHM6 478 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 DUXBA0A1W2PPF3 345 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 APODP05090 189 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HTR1AP08908 422 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GNG4P50150 75 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RHOAP61586 193 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZACNQ401N2 412 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HLA-DQA1Q5Y7H0 255 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF562Q6V9R5 426 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TGIF2LYQ8IUE0 185 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FCRL2Q96LA5 508 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TM7SF3Q9NS93 570 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF226Q9NYT6 803 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 EMC9Q9Y3B6 208 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ADAP1O75689 374 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GHRHP01286 108 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GPM6AP51674 278 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ST3GAL3Q11203 375 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SAXO2Q658L1 398 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FAM24BQ8N5W8 94 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C1orf198Q9H425 327 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PIF1Q9H611 641 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 DMAC2Q9NW81 257 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CD207Q9UJ71 328 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TRBV11-1A0A0K0K1C0 115 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HELTA6NFD8 242 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LRG1P02750 347 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GDF10P55107 478 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GAB4Q2WGN9 574 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 STUMQ69YW2 141 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C6orf201Q7Z4U5 140 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF511Q8NB15 262 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC5A5Q92911 643 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ELOVL1Q9BW60 279 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PCOLCE2Q9UKZ9 415 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZCCHC11Q5TAX3 1644 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 DUSP11O75319 330 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CNMDO75829 334 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CPSF4O95639 269 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HTR5AP47898 357 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PPP1CBP62140 327 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 JOSD1Q15040 202 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PRAMEF8Q5VWM4 474 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PRAMEF7Q5VXH5 474 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CD244Q9BZW8 370 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 AP5M1Q9H0R1 490 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 NPVFQ9HCQ7 196 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MED29Q9NX70 200 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 AGLP35573 1532 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 NEURL1BA8MQ27 555 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FAM171A2A8MVW0 826 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 B4E171 279 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MT-ND6P03923 174 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LPLP06858 475 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PAX1P15863 534 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 AMY2BP19961 511 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HOXC9P31274 260 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PLCXD2Q0VAA5 305 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GLYR1Q49A26 553 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GPR135Q8IZ08 494 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C11orf40Q8WZ69 217 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 EFCAB11Q9BUY7 163 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GABARAPL3Q9BY60 117 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CHST7Q9NS84 486 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FKBP11Q9NYL4 201 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SEMA7AO75326 666 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HERVK_113P61574 105 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CLCQ05315 142 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 EIF3GO75821 320 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GPX4P36969 197 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CEACAM7Q14002 265 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SMAD2Q15796 467 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CRB2Q5IJ48 1285 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CEACAM19Q7Z692 300 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CPXM2Q8N436 756 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SPACA9Q96E40 222 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TEPSINQ96N21 525 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 DCAF13Q9NV06 445 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CCDC187A0A096LP49 1063 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 LINC00587B1AMM8 73 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 DVL2O14641 736 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ANXA4P09525 319 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR4D2P58180 307 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 FXYD6P3P58550 94 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 RPL38P63173 70 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GAMTQ14353 236 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms