RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 LINC00518Q8N0U6 118 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 OR52N1Q8NH53 320 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SLC2A12Q8TD20 617 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SLC37A2Q8TED4 501 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 RSC1A1Q92681 617 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SDF2Q99470 211 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 OR52A5Q9H2C5 316 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 KIR3DX1Q9H7L2 352 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ADAM18Q9Y3Q7 739 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM82A0PJX8 343 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF705GA8MUZ8 300 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF28P17035 718 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CLDN6P56747 220 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 YPEL5P62699 121 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 DGCR2P98153 550 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 KCNAB1Q14722 419 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 YOD1Q5VVQ6 348 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 HEPHL1Q6MZM0 1159 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 DPPA2Q7Z7J5 298 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CDH26Q8IXH8 852 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 OR14K1Q8NGZ2 314 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SLC41A2Q96JW4 573 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CXorf58Q96LI9 332 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SORCS2Q96PQ0 1159 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 VN1R3Q9BXE9 311 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CHRDQ9H2X0 955 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 WDR76Q9H967 626 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF629Q9UEG4 869 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 KIAA0100Q14667 2235 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 TTC3P53804 2025 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 TMED7-TICAM2A0A0A6YYA0 188 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 IGHG1P01857 330 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 PRR35P0CG20 571 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SRMP19623 302 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SDHBP21912 280 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 HTR2CP28335 458 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 MRPS21P82921 87 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CYCSP99999 105 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 MEF2DQ14814 521 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 FAM74A1Q5RGS3 127 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 DPY19L2P2Q6ZN68 376 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 MSRB3Q8IXL7 192 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF679Q8IYX0 411 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 HAVCR2Q8TDQ0 301 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SYT3Q9BQG1 590 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 HINT2Q9BX68 163 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SLC22A11Q9NSA0 550 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 EHFQ9NZC4 300 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 DAPP1Q9UN19 280 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 EXO1Q9UQ84 846 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 TMED7Q9Y3B3 224 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM212A6NML5 194 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 IFNA10P01566 189 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 HBQ1P09105 142 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CDK2P24941 298 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CTGFP29279 349 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 BDKRB2P30411 391 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 FOLR3P41439 243 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 RAD52P43351 418 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 CASP6P55212 293 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 OR10A3P58181 314 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 FABP5Q01469 135 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ALKBH1Q13686 389 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 RBM39Q14498 530 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SSX1Q16384 188 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 BATFQ16520 125 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 EIF2S3LQ2VIR3 472 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF695Q8IW36 515 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ASB17Q8WXJ9 295 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 FOXRED1Q96CU9 486 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SULT4A1Q9BR01 284 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SLC25A32Q9H2D1 315 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 SEMA6CQ9H3T2 930 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 TCRBV16S1A1N1A0A5B0 115 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 AGAP14A8MT82 685 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 F10P00742 488 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 EIF4EP06730 217 aaKnown RBP7.4□□□□□ -1.22
UBE4B-202ENST00000343090 IFNGR1P15260 489 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 RPS27P42677 84 aaKnown RBP7.4□□□□□ -1.22
UBE4B-202ENST00000343090 POLR2HP52434 150 aaKnown RBP7.4□□□□□ -1.22
UBE4B-202ENST00000343090 BIDP55957 195 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 NDUFA6P56556 154 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 RBMS2Q15434 407 aaKnown RBP7.4□□□□□ -1.22
UBE4B-202ENST00000343090 LIMS2Q7Z4I7 341 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 PLPP6Q8IY26 295 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 FAM26EQ8N5C1 309 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 OR4D6Q8NGJ1 314 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 FNDC9Q8TBE3 224 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 APH1BQ8WW43 257 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-202ENST00000343090 ATF6BQ99941 703 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF223Q9UK11 482 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-202ENST00000343090 SRPK3Q9UPE1 567 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 FBXO24O75426 580 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 PRSS23O95084 383 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 GLULP15104 373 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 CD22P20273 847 aa7.4□□□□□ -1.22
UBE4B-202ENST00000343090 MRPL19P49406 292 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms