RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PGBD2Q6P3X8 592 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SMARCD3Q6STE5 483 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TMEM108Q6UXF1 575 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF813Q6ZN06 617 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 DPY19L2P2Q6ZN68 376 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF704Q6ZNC4 412 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF627Q7L945 461 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SYT14Q8NB59 555 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 HDAC2Q92769 488 aaKnown RBP13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 MCHR2Q969V1 340 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 HS3ST6Q96QI5 342 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TSPAN32Q96QS1 320 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 GPX7Q96SL4 187 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 GPA33Q99795 319 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 FOXB1Q99853 325 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ST6GALNAC2Q9UJ37 374 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 RNF115Q9Y4L5 304 aa13.49□□□□□ -0.25
TNFRSF12A-202ENST00000341627 PRR14LQ5THK1 2151 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 DPRXA6NFQ7 191 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 M0R1B8 84 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 XKRYO14609 159 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SEC14L2O76054 403 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF26P17031 533 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SLC6A6P31641 620 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 GSSP48637 474 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ERFP50548 548 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 RPS6KA3P51812 740 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 BSPH1Q075Z2 132 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 CD47Q08722 323 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 PPP1R8Q12972 351 aaKnown RBP13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 MICAQ29983 383 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 RPL13AP3Q6NVV1 102 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 LRFN4Q6PJG9 635 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SPNS3Q6ZMD2 512 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ARIH2OSQ8N7S6 290 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 PAPD5Q8NDF8 572 aaKnown RBP13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 OR9Q2Q8NGE9 314 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF519Q8TB69 540 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 NANOS1Q8WY41 292 aaKnown RBP13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 NINJ1Q92982 152 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF570Q96NI8 536 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 RBP7Q96R05 134 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 KCNK17Q96T54 332 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TMEM204Q9BSN7 226 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 C1QTNF6Q9BXI9 259 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 NELFAQ9H3P2 528 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SMURF2Q9HAU4 748 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 NRIP3Q9NQ35 241 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 MGAT4BQ9UQ53 548 aa13.48□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ARHGEF9O43307 516 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 E2F6O75461 281 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 FARS2O95363 451 aaKnown RBP13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 APEHP13798 732 aaKnown RBP13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 B4GALT1P15291 398 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SDHAP31040 664 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 CAPZA2P47755 286 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF133P52736 654 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 MYBPC1Q00872 1141 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 RFX4Q33E94 735 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 THEM4Q5T1C6 240 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF770Q6IQ21 691 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 AQP11Q8NBQ7 271 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 OR10G2Q8NGC3 310 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 Q96M85 177 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 OR52D1Q9H346 318 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TMEM38BQ9NVV0 291 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 VNN3Q9NY84 501 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 DNAJB9Q9UBS3 223 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 IL20RAQ9UHF4 553 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ADAM18Q9Y3Q7 739 aa13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 MAP1AP78559 2803 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ABCD4O14678 606 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 AHCYL1O43865 530 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 MGRN1O60291 552 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 GASTP01350 101 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 OR8G3PP0DMU2 310 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 GSTM3P21266 225 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 CD40P25942 277 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ARHGDIAP52565 204 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ART1P52961 327 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 FXYD6P3P58550 94 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TUBA1BP68363 451 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TUBA4AP68366 448 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 NRN1LQ496H8 165 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 C10orf128Q5T292 105 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 THSD4Q6ZMP0 1018 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 ZNF620Q6ZNG0 422 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TUBA1AQ71U36 451 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 FAM122BQ7Z309 247 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 FAM169BQ8N8A8 192 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 OR52L1Q8NGH7 329 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 GIPC3Q8TF64 312 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 SLCO4A1Q96BD0 722 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 IFT27Q9BW83 186 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms