RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZNF680Q8NEM1 530 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 OR10AC1Q8NH08 325 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.17□□□□□ -0.3
TDP2-201ENST00000341060 ELF4Q99607 663 aaPredicted RBP13.17□□□□□ -0.3
TDP2-201ENST00000341060 OR10A4Q9H209 315 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 FBXL3Q9UKT7 428 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 UNC13CQ8NB66 2214 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 SPAG17Q6Q759 2223 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 TRAV36DV7A0A075B6V5 113 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 TCRBV16S1A1N1A0A5B0 115 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 G3V3Q6 166 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 ARPC1BO15143 372 aaKnown RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 SLC22A5O76082 557 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 PTHLHP12272 177 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 CPN1P15169 458 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 CSRP1P21291 193 aaKnown RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 CD27P26842 260 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 SELENOPP49908 381 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 EPHA4P54764 986 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 LGALSLQ3ZCW2 172 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 THRSPQ92748 146 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 MCHR2Q969V1 340 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 SORCS2Q96PQ0 1159 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 UTP23Q9BRU9 249 aaKnown RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 NUDT9Q9BW91 350 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 NRSN2Q9GZP1 204 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 METTL17Q9H7H0 456 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 STEAP1Q9UHE8 339 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 KCNG2Q9UJ96 466 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 CDC14CA4D256 554 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 XKRYO14609 159 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 NDUFB5O43674 189 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 GMFGO60234 142 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 EIF4E2O60573 245 aaKnown RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 TSPAN2O60636 221 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 GPANK1O95872 356 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 MT-ATP6P00846 226 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 TMIGD3P0DMS9 266 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 DCTDP32321 178 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 EFNA3P52797 238 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 CAMK2BQ13554 666 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 DEFB133Q30KQ1 61 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 NKAIN2Q5VXU1 208 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 PTCRAQ6ISU1 281 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 FDX2Q6P4F2 183 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
TDP2-201ENST00000341060 Q6ZTK2 550 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 ZNF227Q86WZ6 799 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 OR2T35Q8NGX2 323 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 RADILQ96JH8 1075 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 AMELYQ99218 206 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 NOX3Q9HBY0 568 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 MYO15AQ9UKN7 3530 aa13.16□□□□□ -0.3
TDP2-201ENST00000341060 TO15178 435 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 XRCC3O43542 346 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 NUDT14O95848 222 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 PGCP20142 388 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ITPKBP27987 946 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 KIR3DL2P43630 455 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 MECP2P51608 486 aaKnown RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 ZP2Q05996 745 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 CBFBQ13951 182 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 SGCBQ16585 318 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 LINC00303Q3SY05 128 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ESCO2Q56NI9 601 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 WDR38Q5JTN6 314 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 C1QL3Q5VWW1 255 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 FAAP20Q6NZ36 180 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 POMZP3Q6PJE2 187 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 MAMDC2Q7Z304 686 aaPredicted RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 DEFB119Q8N690 84 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 CEP76Q8TAP6 659 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 METTL21AQ8WXB1 218 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 PIGKQ92643 395 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 MED30Q96HR3 178 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 PTDSS2Q9BVG9 487 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 DHCR7Q9UBM7 475 aaKnown RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 ING1Q9UK53 422 aaPredicted RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 ASXL3Q9C0F0 2248 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 LEUTXA8MZ59 168 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 C11orf98E9PRG8 122 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 LMO7DNF2Z398 122 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 H0YC42 278 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms