RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ICOSLGO75144 302 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 EPPINO95925 133 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 HLA-DPB1P04440 258 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 EIF4EP06730 217 aaKnown RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 PEPDP12955 493 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 ATP6V1E1P36543 226 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 CDH11P55287 796 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 ACY1Q03154 408 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 GK2Q14410 553 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 PPP1R3BQ86XI6 285 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 TRMT10AQ8TBZ6 339 aaKnown RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 CTHRC1Q96CG8 243 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 GAL3ST1Q99999 423 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 VN1R1Q9GZP7 353 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 SLC38A1Q9H2H9 487 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 CA10Q9NS85 328 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 MED9Q9NWA0 146 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 GPR55Q9Y2T6 319 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 CNTRLQ7Z7A1 2325 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 CDC14CA4D256 554 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 FLRT2O43155 660 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 RIDAP52758 137 aaKnown RBP13.71□□□□□ -0.21
BRAT1-201ENST00000340611 EFNB1P98172 346 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 FAM27D1Q5T7N8 215 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 NHLRC1Q6VVB1 395 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 SIAH3Q8IW03 269 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 SAMD12Q8N8I0 201 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 WDSUB1Q8N9V3 476 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 BBS1Q8NFJ9 593 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 GTF3AQ92664 365 aaKnown RBP13.71□□□□□ -0.21
BRAT1-201ENST00000340611 MEGF10Q96KG7 1140 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 PTGFRNQ9P2B2 879 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 NTNG1Q9Y2I2 539 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 EXOSC1Q9Y3B2 195 aaKnown RBP13.71□□□□□ -0.21
BRAT1-201ENST00000340611 PCDHGA1Q9Y5H4 931 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 NUBP2Q9Y5Y2 271 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 MCRIP1C9JLW8 97 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 PEX12O00623 359 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 SFTPCP11686 197 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 AHCYP23526 432 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 EMDP50402 254 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 NKAIN1Q4KMZ8 207 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 SLC30A6Q6NXT4 461 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 CARFQ8N187 725 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF485Q8NCK3 441 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 TMEM185AQ8NFB2 350 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 STT3BQ8TCJ2 826 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 PTPMT1Q8WUK0 201 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-201ENST00000340611 SLC25A28Q96A46 364 aa13.71□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF593O00488 134 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-201ENST00000340611 SUSD5O60279 629 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 H2AFB1P0C5Y9 115 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 SMIM11AP58511 58 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 RHBDD2Q6NTF9 364 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 CDC73Q6P1J9 531 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 DHRS13Q6UX07 377 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 NAA40Q86UY6 237 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 TOMM5Q8N4H5 51 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 SNX33Q8WV41 574 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ZNF607Q96SK3 696 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 TBX5Q99593 518 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 OR10A4Q9H209 315 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ACAD8Q9UKU7 415 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 A0A1W2PRQ8 180 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 PLSCR5A0PG75 271 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 TOX3O15405 576 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-201ENST00000340611 MST1P26927 711 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 S100A11P31949 105 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 PCP4P48539 62 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 PSG6Q00889 435 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ZFP36L1Q07352 338 aaKnown RBP13.7□□□□□ -0.22
BRAT1-201ENST00000340611 SSX2Q16385 188 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 MAPK14Q16539 360 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 C16orf47Q6ZP98 133 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-201ENST00000340611 TMUB2Q71RG4 321 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 COX18Q8N8Q8 333 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 MORN4Q8NDC4 146 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 PXT1Q8NFP0 134 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 C8orf44Q96CB5 159 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 LRFN3Q9BTN0 628 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
BRAT1-201ENST00000340611 TMEM9BQ9NQ34 198 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 FZD7O75084 574 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 SERPINA3P01011 423 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ACP1P24666 158 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 OR10A3P58181 314 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 SLC25A30Q5SVS4 291 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 ZNF614Q8N883 585 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 AKR7LQ8NHP1 331 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 PMM1Q92871 262 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 MED11Q9P086 117 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 KCNE5Q9UJ90 142 aa13.7□□□□□ -0.22
BRAT1-201ENST00000340611 COL27A1Q8IZC6 1860 aaPredicted RBP13.69□□□□□ -0.22
BRAT1-201ENST00000340611 SLC19A2O60779 497 aa13.69□□□□□ -0.22
BRAT1-201ENST00000340611 SLC2A10O95528 541 aa13.69□□□□□ -0.22
BRAT1-201ENST00000340611 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms