RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 SLC35A3Q9Y2D2 325 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 A0A087WV62 115 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 SLC35E2BP0CK96 405 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 GLI4P10075 376 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 BMP1P13497 986 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 POU3F2P20265 443 aaPredicted RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 HHEXQ03014 270 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 PRSS45Q7RTY3 260 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 NUDT19A8MXV4 375 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 H0YIV9 168 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 CA12O43570 354 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 OR5AL1P0C617 328 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 S100A4P26447 101 aaKnown RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 TIGITQ495A1 244 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SYT13Q7L8C5 426 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 ADAMTS16Q8TE57 1224 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 TRIB3Q96RU7 358 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 DDOQ99489 341 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 MYO7BQ6PIF6 2116 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 ZNF593O00488 134 aaPredicted RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 APBB3O95704 486 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 TUSC5Q8IXB3 177 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 FIBINQ8TAL6 211 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 INPP5EQ9NRR6 644 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 CST2P09228 141 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 OR10D4PQ8NGN7 298 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 PINX1Q96BK5 328 aaKnown RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 ULBP2Q9BZM5 246 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SPATA31A1Q5TZJ5 1347 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 ECI1P42126 302 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 MANEALQ5VSG8 457 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 PPP1R3BQ86XI6 285 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SIGLEC10Q96LC7 697 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 MENTQ9BUN1 341 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 PLA2G12AQ9BZM1 189 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 PMS2P2O95744 297 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 CDCA2Q69YH5 1023 aaPredicted RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 LETMD1Q6P1Q0 360 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SYT9Q86SS6 491 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 OR2A1Q8NGT9 310 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 TMEM163Q8TC26 289 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 IRF7Q92985 503 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 ZNF629Q9UEG4 869 aaPredicted RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 ADAMTS13Q76LX8 1427 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 PRAMEF11O60813 436 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SERTAD2Q14140 314 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 OXA1LQ15070 435 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SLC35E1Q96K37 410 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 ALOXE3Q9BYJ1 711 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 SIRT3Q9NTG7 399 aaPredicted RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 CNOT2Q9NZN8 540 aaKnown RBP11.91□□□□□ -0.5
USP47-202ENST00000339865 TRAPPC1Q9Y5R8 145 aa11.91□□□□□ -0.5
USP47-202ENST00000339865 LYPD8Q6UX82 237 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 LRRC56Q8IYG6 542 aaPredicted RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 PGBD5Q8N414 524 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 GPR26Q8NDV2 337 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 MSL2Q9HCI7 577 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 SUSD2Q9UGT4 822 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 OR8G3PP0DMU2 310 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 SRP9P49458 86 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 PPP1CBP62140 327 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 POU3F1Q03052 451 aaPredicted RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 GLYATL3Q5SZD4 288 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 SFXN4Q6P4A7 337 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 PODNL1Q6PEZ8 512 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 ZNF300Q96RE9 604 aaPredicted RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 ATXN1LP0C7T5 689 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 GGNBP1Q5YKI7 109 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 DCAF4L2Q8NA75 395 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 CA5BP1Q8WTZ4 195 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 PLEKHF2Q9H8W4 249 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 APOBEC3BQ9UH17 382 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 CDC14CA4D256 554 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 APEX1P27695 318 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 MOGAT2Q3SYC2 334 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 TMEM106AQ96A25 262 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 KCTD12Q96CX2 325 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 C1orf74Q96LT6 269 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 PCED1AQ9H1Q7 454 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 OR52D1Q9H346 318 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 RARRES3Q9UL19 164 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 MRPS28Q9Y2Q9 187 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 DNAJC15Q9Y5T4 150 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 MTCL1Q9Y4B5 1905 aaKnown RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 J3KTA2 159 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 SGK494L7N484 410 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 RAB1AP62820 205 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 SLC16A14Q7RTX9 510 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms