RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 LRRC55Q6ZSA7 311 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 JAGN1Q8N5M9 183 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF418Q8TF45 676 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ABHD14BQ96IU4 210 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SAMD8Q96LT4 415 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CCL19Q99731 98 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 REPIN1Q9BWE0 567 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SHARPINQ9H0F6 387 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ENKD1Q9H0I2 346 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ATG5Q9H1Y0 275 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SIX2Q9NPC8 291 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SEMA4BQ9NPR2 832 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SLC52A3Q9NQ40 469 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 DMAC2Q9NW81 257 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MED16Q9Y2X0 877 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 RAI2Q9Y5P3 530 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MTCH2Q9Y6C9 303 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CNMDO75829 334 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GIPP09681 153 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GABRA1P14867 456 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NELFEP18615 380 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ERVFC1P60507 584 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MAP4K2Q12851 820 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GAB1Q13480 694 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 UBE2NLQ5JXB2 153 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF362Q5T0B9 420 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 KDM4DQ6B0I6 523 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF600Q6ZNG1 722 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ESPNLQ6ZVH7 1005 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM135Q86UB9 458 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF619Q8N2I2 560 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR4N2Q8NGD1 307 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GPR150Q8NGU9 434 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR6K6Q8NGW6 343 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GPR87Q9BY21 358 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SDR39U1Q9NRG7 319 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 C2orf42Q9NWW7 574 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MMP24Q9Y5R2 645 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ACACBO00763 2458 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SPG11Q96JI7 2443 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 A0A0A6YYC8 382 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MTMR11A4FU01 709 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 H7C1C5 153 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 I3L1I5 382 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 LYRM1O43325 122 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 AP1G1O43747 822 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 F7P08709 466 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PF4V1P10720 104 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NME1P15531 152 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RPA2P15927 270 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 POLR2CP19387 275 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLC6A9P48067 706 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GIPRP48546 466 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RAB7AP51149 207 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 HIST1H3AP68431 136 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CLDN10P78369 228 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PAFAH1B3Q15102 231 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR8G1Q15617 311 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FAM78AQ5JUQ0 283 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PERM1Q5SV97 790 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 AVPI1Q5T686 147 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 DPPA3Q6W0C5 159 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RNF19BQ6ZMZ0 732 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM173Q86WV6 379 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SIAH3Q8IW03 269 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FAM71E2Q8N5Q1 922 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM41AQ96HV5 264 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLC6A18Q96N87 628 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NAA50Q9GZZ1 169 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FZD8Q9H461 694 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 BEX1Q9HBH7 125 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 DNAJB11Q9UBS4 358 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM59LQ9UK28 342 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ATP23Q9Y6H3 246 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 LTBP2Q14767 1821 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 KIAA1549LQ6ZVL6 1849 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CCDC163A0A0D9SF12 145 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 F5H5P2 479 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 APOC3P02656 99 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PGA3P0DJD8 388 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 C8orf89P0DMQ9 161 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OSMP13725 252 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 AMY2BP19961 511 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PSMB1P20618 241 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GGT5P36269 586 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 DCTP40126 519 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 HBA1P69905 142 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLC10A1Q14973 349 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TAF9Q16594 264 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 UGCGQ16739 394 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MICAQ29983 383 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ABHD17CQ6PCB6 329 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 EPGNQ6UW88 154 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM184AQ6ZMB5 413 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF765Q7L2R6 523 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZFAND4Q86XD8 727 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NRMQ8IXM6 262 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PLPP5Q8NEB5 264 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GJC3Q8NFK1 279 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 UBTD2Q8WUN7 234 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms