RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 UPB1Q9UBR1 384 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 ZNF860A6NHJ4 632 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 FAM25EA8MYX2 175 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 OR2T1O43869 369 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 BRINP1O60477 761 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 MOSPD3O75425 235 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 DDX6P26196 483 aaKnown RBP eCLIP18.32■□□□□ 0.523e-8■□□□□ 9.6
UBC-201ENST00000339647 CDKN2AP42771 156 aaKnown RBP18.32■□□□□ 0.52
UBC-201ENST00000339647 ZNF234Q14588 700 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 SLC35D3Q5M8T2 416 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 SFTPA1Q8IWL2 248 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 DMBX1Q8NFW5 382 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 GPX8Q8TED1 209 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 LRFN5Q96NI6 719 aa18.32■□□□□ 0.52
UBC-201ENST00000339647 SGCEO43556 437 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 IFNA4P05014 189 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 CSN2P05814 226 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 TACSTD2P09758 323 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 PTGFRP43088 359 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 SNRPEP62304 92 aaKnown RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 C10orf91Q5T1B1 145 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 KIRREL2Q6UWL6 708 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 RBMS3Q6XE24 437 aaKnown RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 SLC39A5Q6ZMH5 540 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 ZNF813Q6ZN06 617 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 GTPBP8Q8N3Z3 284 aaPredicted RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 ZNF676Q8N7Q3 588 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 LMF1Q96S06 567 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 TRPM6Q9BX84 2022 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 MBNL1Q9NR56 388 aaKnown RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 MYEF2Q9P2K5 600 aaKnown RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 IKZF2Q9UKS7 526 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 CARHSP1Q9Y2V2 147 aaKnown RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 ALPK2Q86TB3 2170 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 LILRB3O75022 631 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 FABP1P07148 127 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 INPP5JQ15735 1006 aaPredicted RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 ZNF77Q15935 545 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 SCGB2B2Q4G0G5 96 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 DPY19L2P2Q6ZN68 376 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 OR1J4Q8NGS1 313 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 TREM1Q9NP99 234 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 DUSP22Q9NRW4 184 aa18.31■□□□□ 0.52
UBC-201ENST00000339647 FARSAQ9Y285 508 aaKnown RBP18.31■□□□□ 0.52
UBC-201ENST00000339647 TRBV5-7A0A0A0MS05 114 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 CPED1A4D0V7 1026 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 TVP23AA6NH52 213 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 OR4C45A6NMZ5 311 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 HLA-AP01891 365 aaKnown RBP18.3■□□□□ 0.52
UBC-201ENST00000339647 CBR1P16152 277 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 RBM34P42696 430 aaKnown RBP18.3■□□□□ 0.52
UBC-201ENST00000339647 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 OR4A4PQ8NGN8 299 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 SEH1LQ96EE3 360 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 ZMAT3Q9HA38 289 aaKnown RBP18.3■□□□□ 0.52
UBC-201ENST00000339647 DNAH14Q0VDD8 3507 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 FGF16O43320 207 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 ABHD16AO95870 558 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 MELTFP08582 738 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 TAS2R19P59542 299 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 DHCR24Q15392 516 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 TMEM205Q6UW68 189 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 CDRT4Q8N9R6 151 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 ZNF417Q8TAU3 575 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 EDAQ92838 391 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 GAL3ST3Q96A11 431 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 FAM3DQ96BQ1 224 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 ZBTB8AQ96BR9 441 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 POTEKPQ9BYX7 375 aa18.3■□□□□ 0.52
UBC-201ENST00000339647 DNAJB12Q9NXW2 375 aaKnown RBP18.3■□□□□ 0.52
UBC-201ENST00000339647 DHCR7Q9UBM7 475 aaKnown RBP18.3■□□□□ 0.52
UBC-201ENST00000339647 SRPX2O60687 465 aaPredicted RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 SNAPINO95295 136 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 CT62P0C5K7 136 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 P2RY2P41231 377 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 NR0B1P51843 470 aaKnown RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 SRSF4Q08170 494 aaKnown RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 VWA2Q5GFL6 755 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 EXOSC6Q5RKV6 272 aaKnown RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 ZNF425Q6IV72 752 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 LINC00114Q6XXX2 140 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 USP53Q70EK8 1073 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 FAM122BQ7Z309 247 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 OR5AP2Q8NGF4 316 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 SMARCD2Q92925 531 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 CPNE2Q96FN4 548 aaPredicted RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 CNTNAP3BQ96NU0 1288 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 LOC100509620A0A075B734 347 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 RAD1O60671 282 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 ZNF28P17035 718 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 FAM53BQ14153 422 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 ZNF627Q7L945 461 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 ZNF595Q8IYB9 648 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 SLC43A2Q8N370 569 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 OR2G2Q8NGZ5 317 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 SLC25A21Q9BQT8 299 aaPredicted RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 SRA1Q9HD15 236 aaKnown RBP18.29■□□□□ 0.52
UBC-201ENST00000339647 GSN-AS1Q9NRJ2 163 aa18.29■□□□□ 0.52
UBC-201ENST00000339647 MBD2Q9UBB5 411 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms