RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TMEM69Q5SWH9 247 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 PWWP2BQ6NUJ5 590 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 RPL22L1Q6P5R6 122 aaKnown RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 PXT1Q8NFP0 134 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 BPIFA2Q96DR5 249 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 S100A16Q96FQ6 103 aaKnown RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 DNTTIP1Q9H147 329 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 SLC25A32Q9H2D1 315 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 PURGQ9UJV8 347 aaKnown RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 PLCL2Q9UPR0 1127 aa17.07■□□□□ 0.32
PSPC1-201ENST00000338910 MRPS33Q9Y291 106 aaKnown RBP17.07■□□□□ 0.32
PSPC1-201ENST00000338910 UBE2QL1A1L167 161 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 LILRA5A6NI73 299 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 F5H5P2 479 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 BCAT2O15382 392 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-201ENST00000338910 SIGLEC6O43699 453 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 FMO6PO60774 539 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 PIAS2O75928 621 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 SPDEFO95238 335 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 GABRA4P48169 554 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 PGDP52209 483 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 CLDN12P56749 244 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 NNATQ16517 81 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 SYNPRQ8TBG9 265 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 DNASE2BQ8WZ79 361 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 PHYHIPQ92561 330 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 SLC25A18Q9H1K4 315 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 TMEM131Q92545 1883 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 TRAV27A0A087WT01 109 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 CLDN4O14493 209 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 PPP1R3DO95685 299 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 AK1P00568 194 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 IGKV1D-16P01601 117 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 RPA2P15927 270 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 AFF3P51826 1226 aaKnown RBP17.06■□□□□ 0.32
PSPC1-201ENST00000338910 SKP1P63208 163 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 DEFA5Q01523 94 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 PLAURQ03405 335 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-201ENST00000338910 DCAF12L2Q5VW00 463 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 RELL2Q8NC24 303 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-201ENST00000338910 OR2AK2Q8NG84 335 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 UCK1Q9HA47 277 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 PDE7BQ9NP56 450 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 SLC6A5Q9Y345 797 aa17.06■□□□□ 0.32
PSPC1-201ENST00000338910 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 SYNDIG1LA6NDD5 238 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 RHPN2P1A8MT19 583 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 PRAMEF2O60811 474 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 NSA2O95478 260 aaKnown RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 RAB40ALP0C0E4 278 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 CDK2P24941 298 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 FNTBP49356 437 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 FGL1Q08830 312 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 FAM53BQ14153 422 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 OGFOD3Q6PK18 319 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 ZNF595Q8IYB9 648 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 RAB40AQ8WXH6 277 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 HAVCR1Q96D42 359 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 ZMYND19Q96E35 227 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 DGAT2Q96PD7 388 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 IFT22Q9H7X7 185 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 OR5V1Q9UGF6 321 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 MRTO4Q9UKD2 239 aaKnown RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 KCNK7Q9Y2U2 307 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 A0A0C4DFX4 3053 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 H2AFB1P0C5Y9 115 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 OR2T7P0C7T2 308 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 EDNRAP25101 427 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 MNDAP41218 407 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 HOXA1P49639 335 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 ART1P52961 327 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 GMFBP60983 142 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 C14orf28Q4W4Y0 310 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 DNM1P46Q6ZS02 220 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 ZNF433Q8N7K0 673 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 OR2T27Q8NH04 317 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 OR51A7Q8NH64 312 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 NKX6-2Q9C056 277 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-201ENST00000338910 MFFQ9GZY8 342 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 SCPEP1Q9HB40 452 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 LRIT1Q9P2V4 623 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 CLDN16Q9Y5I7 305 aa17.05■□□□□ 0.32
PSPC1-201ENST00000338910 A0A1B0GVT2 93 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 ACOD1A6NK06 481 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 GOSR2O14653 212 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 TMEM127O75204 238 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 RBMS2Q15434 407 aaKnown RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 UBALD2Q8IYN6 164 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 GRHL3Q8TE85 626 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 USB1Q9BQ65 265 aaKnown RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 BARX1Q9HBU1 254 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 ICAM5Q9UMF0 924 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 TLCD2A6NGC4 264 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 PRKNO60260 465 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 GPRIN2O60269 458 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 HOXB1P14653 301 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 OR1D5P58170 312 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 UBE2MP61081 183 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms