RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ZNF426Q9BUY5 554 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 EVA1AQ9H8M9 152 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 DYNLRB1Q9NP97 96 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 DUSP13Q9UII6 198 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 IGKV1D-43A0A0B4J1Z2 117 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 NDUFS8O00217 210 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 WNT9BO14905 357 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 BCL10O95999 233 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 CLPTM1O96005 669 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 IFNA2P01563 188 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 FAM157BP0CG42 384 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 PGA4P0DJD7 388 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 PGA3P0DJD8 388 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF23P17027 643 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 GLRXP35754 106 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 RPL18Q07020 188 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 FXNQ16595 210 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 FAM120AOSQ5T036 256 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 PIWIL3Q7Z3Z3 882 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 SLC30A8Q8IWU4 369 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF786Q8N393 782 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 POU5F2Q8N7G0 328 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 OR4K5Q8NGD3 323 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 NEU4Q8WWR8 484 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF566Q969W8 418 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 MRPL24Q96A35 216 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 SLC25A44Q96H78 314 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 MPP4Q96JB8 637 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 TSPAN32Q96QS1 320 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 PCDHAC1Q9H158 963 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 RNF121Q9H920 327 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ARMCX1Q9P291 453 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 RHCGQ9UBD6 479 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF229Q9UJW7 825 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 SNX13Q9Y5W8 968 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
NUDCD3-201ENST00000338427 OR7A10O76100 309 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 RAB36O95755 333 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 MT-ND1P03886 318 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 SERPINA5P05154 406 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 VIMP08670 466 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 OR8G3PP0DMU2 310 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 NAT2P11245 290 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 CDAP32320 146 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 KDELR2P33947 212 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 TAS2R41P59536 307 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 GUCY1A3Q02108 690 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 RIN1Q13671 783 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 CYBRD1Q53TN4 286 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 GKAP1Q5VSY0 366 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 FAM166AQ6J272 317 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 NANOGNBQ7Z5D8 188 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 LRRC18Q8N456 261 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 YIPF5Q969M3 257 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 SGTBQ96EQ0 304 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 TPD52L3Q96J77 140 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 MRPL13Q9BYD1 178 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 NARFLQ9H6Q4 476 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 ARGLU1Q9NWB6 273 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 CMTM6Q9NX76 183 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 KCNS2Q9ULS6 477 aa11.48□□□□□ -0.57
NUDCD3-201ENST00000338427 J3KTA2 159 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 SYNGR3O43761 229 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 UBL3O95164 117 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 SLC2A10O95528 541 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 GIFP27352 417 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 CLRN1P58418 232 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 CCNIQ14094 377 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 LRRC23Q53EV4 343 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 IGFN1Q86VF2 1251 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 OR8J3Q8NGG0 315 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 ASB10Q8WXI3 467 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 NSMAFQ92636 917 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 MOV10Q9HCE1 1003 aaKnown RBP11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 INIPQ9NRY2 104 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 TMEM160Q9NX00 188 aa11.47□□□□□ -0.57
NUDCD3-201ENST00000338427 NCR1O76036 304 aa11.46□□□□□ -0.57
NUDCD3-201ENST00000338427 OR5F1O95221 314 aa11.46□□□□□ -0.57
NUDCD3-201ENST00000338427 TACSTD2P09758 323 aa11.46□□□□□ -0.57
NUDCD3-201ENST00000338427 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
NUDCD3-201ENST00000338427 ACADSP16219 412 aa11.46□□□□□ -0.57
NUDCD3-201ENST00000338427 APEX1P27695 318 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-201ENST00000338427 RBMXP38159 391 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms