RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 C15orf39Q6ZRI6 1047 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 ATOH8Q96SQ7 321 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 EMC9Q9Y3B6 208 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 NPIPB15A6NHN6 443 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 YKT6O15498 198 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 DUSP1P28562 367 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 FOXK2Q01167 660 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CTU2Q2VPK5 515 aaKnown RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 USP53Q70EK8 1073 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 USP51Q70EK9 711 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 FGGYQ96C11 551 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 NARFLQ9H6Q4 476 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 ADAM29Q9UKF5 820 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 SNED1Q8TER0 1413 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 DDAH2O95865 285 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 FGF7P21781 194 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CD70P32970 193 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 SLC35A2P78381 396 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF528Q3MIS6 628 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 C1QTNF12Q5T7M4 302 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 TMEM268Q5VZI3 342 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 LIPIQ6XZB0 460 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 OVCH1Q7RTY7 1134 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 PIANPQ8IYJ0 282 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 OR52N1Q8NH53 320 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 U3KQ87 197 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 ENSAO43768 121 aaKnown RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 GABRA4P48169 554 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 PXNP49023 591 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CORINQ9Y5Q5 1042 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 SELENOFO60613 162 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CSF2RBP32927 897 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CDK5Q00535 292 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 HHEXQ03014 270 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 SLC38A5Q8WUX1 472 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 UBXN10Q96LJ8 280 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 GHRLQ9UBU3 117 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF320A2RRD8 509 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 BTBD17A6NE02 478 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF354AO60765 605 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 S100A7P31151 101 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 UBE2G1P62253 170 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 TRA2BP62995 288 aaKnown RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ENDOGQ14249 297 aaKnown RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 FAAP20Q6NZ36 180 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF852Q6ZMS4 543 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 LSMEM1Q8N8F7 131 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 UBAC2Q8NBM4 344 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 TMEM255BQ8WV15 326 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 TSLPQ969D9 159 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF845Q96IR2 970 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 EVA1AQ9H8M9 152 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 APOBEC3BQ9UH17 382 aaKnown RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 SOD2P04179 222 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 NKX2-1P43699 371 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF140P52738 457 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 RHBDD1Q8TEB9 315 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 AKR1E2Q96JD6 320 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ARNT2Q9HBZ2 717 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CGGBP1Q9UFW8 167 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 A0A0A6YYC8 382 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 I3L1I5 382 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 TCAPO15273 167 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 SNRPNP63162 240 aaKnown RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CRMP1Q14194 572 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CEBPEQ15744 281 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 TOMM20LQ6UXN7 152 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 LYSMD1Q96S90 227 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ADOQ96SZ5 270 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 LPAR4Q99677 370 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 AMBRA1Q9C0C7 1298 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ENKD1Q9H0I2 346 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 PISDQ9UG56 409 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF840PA6NDX5 716 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 GPX5O75715 221 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CSF3P09919 207 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 SFTA3P0C7M3 94 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF93P35789 620 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-201ENST00000334504 HTR5AP47898 357 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 SLC17A1Q14916 467 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 B3GNT9Q6UX72 402 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF534Q76KX8 674 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CNTN4Q8IWV2 1026 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 LAMP3Q9UQV4 416 aa9.06□□□□□ -0.96
COL4A6-201ENST00000334504 CIDEAO60543 219 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 MTHFD2P13995 350 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 EPHA5P54756 1037 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 KCNJ10P78508 379 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 ZP2Q05996 745 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 MZT1Q08AG7 82 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 Q1RN00 199 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 COX20Q5RI15 118 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 OR5M10Q6IEU7 315 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 GLIPR1L1Q6UWM5 242 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 ADIPOR2Q86V24 386 aa9.05□□□□□ -0.96
COL4A6-201ENST00000334504 ATF6BQ99941 703 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms