RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RAB13P51153 203 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 SNRPNP63162 240 aaKnown RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 PAN3Q58A45 887 aaKnown RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 MANEAQ5SRI9 462 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 COX14Q96I36 57 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 C10orf90Q96M02 699 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 ALG12Q9BV10 488 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 ATG5Q9H1Y0 275 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 SRA1Q9HD15 236 aaKnown RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 SERTAD3Q9UJW9 196 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 FBXO4Q9UKT5 387 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 CELSR3Q9NYQ7 3312 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 A0A0B4J2E0 115 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 A0A1B0GX12 115 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 CCDC85CA6NKD9 419 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 BLOC1S5-TXNDC5H3BN57 136 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 RAB3DO95716 219 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 DLSTP36957 453 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SNTB1Q13884 538 aaKnown RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 HNRNPA1L2Q32P51 320 aaKnown RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 UNQ6126/PRO20091Q6UXV3 157 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ADAMTSL4Q6UY14 1074 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 MOB3CQ70IA8 216 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 PTDSS2Q9BVG9 487 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 OBSL1O75147 1896 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 TRAV14DV4A0A0A6YYC5 116 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 PRR32B1ATL7 298 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 AMY2AP04746 511 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SLC35G6P0C7Q6 338 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 BDKRB2P30411 391 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 GLT8D1Q68CQ7 371 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SLC6A19Q695T7 634 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ZNF627Q7L945 461 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 LDLRAD3Q86YD5 345 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 CDRT4Q8N9R6 151 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 MFSD9Q8NBP5 474 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 LMF1Q96S06 567 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 RAB11FIP5Q9BXF6 653 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 NIT2Q9NQR4 276 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 CTSFQ9UBX1 484 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ICAM5Q9UMF0 924 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 LTBP2Q14767 1821 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 TRBV23OR9-2A0A075B6M9 112 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 TVP23AA6NH52 213 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 FADS1O60427 444 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 RAD1O60671 282 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 SLC25A12O75746 678 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 PTAFRP25105 342 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 P2RY2P41231 377 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 RPS27P42677 84 aaKnown RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 POU3F4P49335 361 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ALKBH1Q13686 389 aaKnown RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 CEBPEQ15744 281 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 C2orf27AQ580R0 203 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ARHGAP40Q5TG30 622 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 OR10AC1Q8NH08 325 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 TSEN15Q8WW01 171 aaKnown RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 MBNL1Q9NR56 388 aaKnown RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 STEAP1Q9UHE8 339 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 C19orf53Q9UNZ5 99 aaPredicted RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 ZNF337Q9Y3M9 751 aa12.5□□□□□ -0.41
SYNE3-201ENST00000334258 NUP210Q8TEM1 1887 aaPredicted RBP12.5□□□□□ -0.41
SYNE3-201ENST00000334258 EDDM13A0A1B0GTR0 161 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 ELOA3DA6NLF2 546 aaPredicted RBP12.49□□□□□ -0.41
SYNE3-201ENST00000334258 CD34P28906 385 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 RORAP35398 523 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 ELOA3BQ3SY89 546 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 ELOA3Q8NG57 546 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 POTEKPQ9BYX7 375 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 TRIM2Q9C040 744 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 COMMD4Q9H0A8 199 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 TREM1Q9NP99 234 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 DTX4Q9Y2E6 619 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 DENND4CQ5VZ89 1909 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 C4orf47A7E2U8 309 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 B3GALT2O43825 422 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 CTAG2O75638 210 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 PMS2P2O95744 297 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 F12P00748 615 aaPredicted RBP12.49□□□□□ -0.41
SYNE3-201ENST00000334258 CD1AP06126 327 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 PRAMEF17Q5VTA0 474 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 ENPP7Q6UWV6 458 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 INO80EQ8NBZ0 244 aaPredicted RBP12.49□□□□□ -0.41
SYNE3-201ENST00000334258 PAQR8Q8TEZ7 354 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 LCN9Q8WX39 176 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 FGF14Q92915 247 aa12.49□□□□□ -0.41
SYNE3-201ENST00000334258 GAL3ST3Q96A11 431 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms