RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TBC1D3Q8IZP1 549 aaPredicted RBP21.44■■□□□ 1.02
TSKU-201ENST00000333090 SPACA7Q96KW9 195 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 GAL3ST1Q99999 423 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4Q9UBX2 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 PLCL2Q9UPR0 1127 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 ZNF254O75437 659 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 ITGA5P08648 1049 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 RAB3AP20336 220 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 CTXN1P60606 82 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DPY19L4Q7Z388 723 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 BEST3Q8N1M1 668 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 OR4C3Q8NH37 302 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 SLC6A5Q9Y345 797 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 TRBV5-7A0A0A0MS05 114 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 GLULP15104 373 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 MGMTP16455 207 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 STARP49675 285 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 MC2RQ01718 297 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 TANGO2Q6ICL3 276 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 ZNF595Q8IYB9 648 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 GATSQ8NAP1 163 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 CLEC1AQ8NC01 280 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 TSEN15Q8WW01 171 aaKnown RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 TSACCQ96A04 125 aaPredicted RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 RDH16O75452 317 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 OR4E1P0C645 316 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 UBBP0CG47 229 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 UBCP0CG48 685 aaKnown RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 RPS27AP62979 156 aaKnown RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 UBA52P62987 128 aaKnown RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 LY6G6FQ5SQ64 297 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 CDC20BQ86Y33 519 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 C12orf45Q8N5I9 185 aaPredicted RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 RBM18Q96H35 190 aaKnown RBP21.43■■□□□ 1.02
TSKU-201ENST00000333090 MOGAT1Q96PD6 335 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 TMEM185BQ9H7F4 350 aa21.43■■□□□ 1.02
TSKU-201ENST00000333090 EFCAB7A8K855 629 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 CD14P08571 375 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 SLC35E2P0CK97 266 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 S1PR1P21453 382 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ZNF141Q15928 474 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ALG10Q5BKT4 473 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 MCATQ8IVS2 390 aaKnown RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 GPX7Q96SL4 187 aaPredicted RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 LMF2Q9BU23 707 aaKnown RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 WDR13Q9H1Z4 485 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 WDR76Q9H967 626 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 RASL12Q9NYN1 266 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 IGKV1D-42A0A075B6H8 117 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 RAD1O60671 282 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 SCAND1P57086 179 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 C2orf76Q3KRA6 126 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ARHGAP40Q5TG30 622 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 OTPQ5XKR4 325 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 NPSR1Q6W5P4 371 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 FAM122BQ7Z309 247 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 PRSS35Q8N3Z0 413 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 HOXB13Q92826 284 aaPredicted RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 ATG5Q9H1Y0 275 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 TMEM82A0PJX8 343 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ELOA3DA6NLF2 546 aaPredicted RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 TMEM212A6NML5 194 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 H0Y8X5 98 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 AKR7A3O95154 331 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 GPANK1O95872 356 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 CCKBRP32239 447 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 LSSP48449 732 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 LUMP51884 338 aaPredicted RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 SLC25A1P53007 311 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 SEC13P55735 322 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ITPRIPL2Q3MIP1 535 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ELOA3BQ3SY89 546 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 LRRC37A5PQ49AS3 106 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 GABRG1Q8N1C3 465 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 EXD3Q8N9H8 876 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 BOLLQ8N9W6 283 aaKnown RBP21.42■■□□□ 1.02
TSKU-201ENST00000333090 STEAP2Q8NFT2 490 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ELOA3Q8NG57 546 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 CCDC107Q8WV48 283 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 SLC25A28Q96A46 364 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 FAM3DQ96BQ1 224 aa21.42■■□□□ 1.02
TSKU-201ENST00000333090 ARHGEF17Q96PE2 2063 aaPredicted RBP21.41■■□□□ 1.02
TSKU-201ENST00000333090 F5P12259 2224 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 CDC40O60508 579 aaKnown RBP eCLIP21.41■■□□□ 1.02
TSKU-201ENST00000333090 WNT11O96014 354 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 GPR18Q14330 331 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 BEX5Q5H9J7 111 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 LRRC69Q6ZNQ3 347 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 LINC00518Q8N0U6 118 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 BPIFCQ8NFQ6 507 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 SCARF2Q96GP6 870 aaPredicted RBP21.41■■□□□ 1.02
TSKU-201ENST00000333090 SAV1Q9H4B6 383 aaPredicted RBP21.41■■□□□ 1.02
TSKU-201ENST00000333090 KNL1Q8NG31 2342 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 SERINC4A6NH21 518 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 M0QYG6 137 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 ZNF432O94892 652 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 PMS2P2O95744 297 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 ITGB2P05107 769 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 CCR4P51679 360 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 PSMD4P55036 377 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms