RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 HSD17B13Q7Z5P4 300 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-201ENST00000331920 PKMYT1Q99640 499 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 CD207Q9UJ71 328 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 LRRC3CA6NJW4 275 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 TNFSF8P32971 234 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 IGSF21Q96ID5 467 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 DUSP23Q9BVJ7 150 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 FAM117AQ9C073 453 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 EGLN1Q9GZT9 426 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 UBQLN4Q9NRR5 601 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 TRAPPC4Q9Y296 219 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF93P35789 620 aaPredicted RBP15.18■□□□□ 0.02
PTCH1-201ENST00000331920 MMP12P39900 470 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 IRF4Q15306 451 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 BANF2Q9H503 90 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 PLEKHF2Q9H8W4 249 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 C5orf52A6NGY3 159 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 H2AFB1P0C5Y9 115 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 GDNFP39905 211 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 OR52E1Q8NGJ3 308 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 OR4A4PQ8NGN8 299 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 NTPCRQ9BSD7 190 aaKnown RBP15.18■□□□□ 0.02
PTCH1-201ENST00000331920 NKX6-2Q9C056 277 aaPredicted RBP15.18■□□□□ 0.02
PTCH1-201ENST00000331920 H3BQ06 376 aaPredicted RBP15.18■□□□□ 0.02
PTCH1-201ENST00000331920 GPR31O00270 319 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 HMGN2P05204 90 aaKnown RBP15.18■□□□□ 0.02
PTCH1-201ENST00000331920 IAPPP10997 89 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 GPR12P47775 334 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 CEACAM7Q14002 265 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 HAVCR2Q8TDQ0 301 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 FRMPD1Q5SYB0 1578 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 NME4O00746 187 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 HTN1P15515 57 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 PMCHP20382 165 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 WNT7BP56706 349 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 B3GNT8Q7Z7M8 397 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 ADIPOR2Q86V24 386 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 EMC7Q9NPA0 242 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 ATP13A2Q9NQ11 1180 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 SOCS7O14512 581 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 AREGP15514 252 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 RGRP47804 291 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 LGI3Q8N145 548 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 OR2T6Q8NHC8 308 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 KIRREL1Q96J84 757 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 FBXL4Q9UKA2 621 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF623O75123 536 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 SULT1A2P50226 295 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 LCN8Q6JVE9 175 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 OR6V1Q8N148 313 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 SCRG1O75711 98 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 PDZK1IP1Q13113 114 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 DEFB108BQ8NET1 73 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 CMBLQ96DG6 245 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 SPACA1Q9HBV2 294 aa15.18■□□□□ 0.02
PTCH1-201ENST00000331920 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 STC2O76061 302 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 PROZP22891 400 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 C21orf33P30042 268 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-201ENST00000331920 ERHP84090 104 aaKnown RBP15.17■□□□□ 0.02
PTCH1-201ENST00000331920 ADAMTS14Q8WXS8 1223 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 MARC2Q969Z3 335 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 FUBP1Q96AE4 644 aaKnown RBP15.17■□□□□ 0.02
PTCH1-201ENST00000331920 DIP2BQ9P265 1576 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 EVPLQ92817 2033 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 DTWD1Q8N5C7 304 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 COMMD1Q8N668 190 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 NMNAT3Q96T66 252 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 ST6GALNAC4Q9H4F1 302 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 SLC23A1Q9UHI7 598 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 RNASET2O00584 256 aaKnown RBP15.17■□□□□ 0.02
PTCH1-201ENST00000331920 FABP7O15540 132 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 TAS2R60P59551 318 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 ERVFC1-1P60608 527 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 EIF4HQ15056 248 aaKnown RBP15.17■□□□□ 0.02
PTCH1-201ENST00000331920 LEXMQ3ZCV2 418 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 FA2HQ7L5A8 372 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 MISPQ8IVT2 679 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 OR13D1Q8NGV5 346 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 IGLV3-22A0A075B6J6 115 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 PRAMEF26H0Y7S4 382 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 SIGLEC6O43699 453 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 COX7A2P2O60397 106 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 KIAA1024LP59773 190 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 MFAP5Q13361 173 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 GLYATL3Q5SZD4 288 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 TGIF2LYQ8IUE0 185 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 DHRS4Q9BTZ2 278 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 OR51I2Q9H344 312 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 SIX4Q9UIU6 781 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 PTPRMP28827 1452 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 A0A087WV62 115 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 LTB4RQ15722 352 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 SIGLEC10Q96LC7 697 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 PARD6AQ9NPB6 346 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 ARSAP15289 507 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 APEX1P27695 318 aaKnown RBP15.17■□□□□ 0.02
PTCH1-201ENST00000331920 NHLH1Q02575 133 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms