RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ALG12Q9BV10 488 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 FAM117AQ9C073 453 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 MBNL1Q9NR56 388 aaKnown RBP8.79□□□□□ -1
PTPRA-202ENST00000318266 RXFP3Q9NSD7 469 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 C14orf105Q9NVL8 296 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 ZNF629Q9UEG4 869 aaPredicted RBP8.79□□□□□ -1
PTPRA-202ENST00000318266 SPEGQ15772 3267 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 A0A0B4J2E0 115 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 A0A1B0GX12 115 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ELOA3DA6NLF2 546 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 RNGTTO60942 597 aaKnown RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 DCNP07585 359 aaKnown RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 THBS1P07996 1170 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ITGA5P08648 1049 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ACAA1P09110 424 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 EPCAMP16422 314 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 AGTR1P30556 359 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 MNDAP41218 407 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 RIPPLY1Q0D2K3 151 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 SRSF5Q13243 272 aaKnown RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 ELOA3BQ3SY89 546 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 C11orf87Q6NUJ2 197 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 GABRG1Q8N1C3 465 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 GTPBP8Q8N3Z3 284 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 KCNRGQ8N5I3 272 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 NPEPL1Q8NDH3 523 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ELOA3Q8NG57 546 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 OR4N2Q8NGD1 307 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 TMED6Q8WW62 240 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 TRIM43Q96BQ3 446 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 ICAM5Q9UMF0 924 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 KCNK7Q9Y2U2 307 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 LRRK1Q38SD2 2015 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 TRPM6Q9BX84 2022 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 A0A0B4J2A0 478 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 C13orf42A0A1B0GVH6 325 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 CPED1A4D0V7 1026 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 AGPAT2O15120 278 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 PRKNO60260 465 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 SNAPC5O75971 98 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 VAMP1P23763 118 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 MAPK3P27361 379 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 CCKBRP32239 447 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 PGDP52209 483 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ARFIP1P53367 373 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 FAM53BQ14153 422 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 OR10K2Q6IF99 312 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 C3orf33Q6P1S2 294 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ETV3LQ6ZN32 361 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 LRRC69Q6ZNQ3 347 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ANKRD33Q7Z3H0 272 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 GLYATL2Q8WU03 294 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 SMARCD2Q92925 531 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 MFRPQ9BY79 579 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 GAREM1Q9H706 876 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 MBD2Q9UBB5 411 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 SHPKQ9UHJ6 478 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 MRM2Q9UI43 246 aaKnown RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 TNFSF18Q9UNG2 199 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 SCN5AQ14524 2016 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 DCTN6O00399 190 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 GMFGO60234 142 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 F13BP05160 661 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 FABP1P07148 127 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 PEBP1P30086 187 aaKnown RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 WASP42768 502 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 PTGFRP43088 359 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 SKP1P63208 163 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 SQSTM1Q13501 440 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ALKBH1Q13686 389 aaKnown RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 AVPI1Q5T686 147 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 KIRREL2Q6UWL6 708 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 PRSS41Q7RTY9 318 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 ZSCAN1Q8NBB4 408 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 CLEC1AQ8NC01 280 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 OR6N2Q8NGY6 317 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 OR8D1Q8WZ84 308 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 PPP1R14AQ96A00 147 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
PTPRA-202ENST00000318266 HRH4Q9H3N8 390 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 NIT2Q9NQR4 276 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 TAS2R8Q9NYW2 309 aa8.78□□□□□ -1
PTPRA-202ENST00000318266 FITM1A5D6W6 292 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 AGR2O95994 175 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 PBX2P40425 430 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 CASRP41180 1078 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 CDKN2AP42771 156 aaKnown RBP8.77□□□□□ -1.01
PTPRA-202ENST00000318266 PRKXP51817 358 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 DPTQ07507 201 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 RUNX2Q13950 521 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 MPPED2Q15777 294 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 SMAD2Q15796 467 aaKnown RBP8.77□□□□□ -1.01
PTPRA-202ENST00000318266 C2orf76Q3KRA6 126 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 ATPAF1Q5TC12 328 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-202ENST00000318266 ENPP7Q6UWV6 458 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 DPY19L4Q7Z388 723 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 GATSQ8NAP1 163 aa8.77□□□□□ -1.01
PTPRA-202ENST00000318266 INO80EQ8NBZ0 244 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms