RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SDHAF3Q9NRP4 125 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 C14orf105Q9NVL8 296 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 GPR160Q9UJ42 338 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 GPR52Q9Y2T5 361 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 MCRIP1C9JLW8 97 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 L7N2F9 121 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 CASKO14936 926 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 ONECUT2O95948 504 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 HPP00738 406 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 CSTAP01040 98 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 CXCL2P19875 107 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 NFYAP23511 347 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 RPS7P62081 194 aaKnown RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 FHL1Q13642 323 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 RNF113BQ8IZP6 322 aaKnown RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 BMPERQ8N8U9 685 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 OR5M9Q8NGP3 310 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 MRPL48Q96GC5 212 aaKnown RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF582Q96NG8 517 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 GAL3ST4Q96RP7 486 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 PDCD10Q9BUL8 212 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 WWTR1Q9GZV5 400 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 KIF26BQ2KJY2 2108 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 C2orf92A0A1B0GVN3 265 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 TMEM129A0AVI4 362 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 LNP1A1A4G5 178 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 UNC119BA6NIH7 251 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 WRBO00258 174 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 LANCL1O43813 399 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 RAD1O60671 282 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 UTS2O95399 124 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 SLC2A10O95528 541 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 CH25HO95992 272 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 ACAA1P09110 424 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF28P17035 718 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 GALP22466 123 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 WNT4P56705 351 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 HLXQ14774 488 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF124Q15973 351 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 PGGHGQ32M88 737 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 SLC25A25Q6KCM7 469 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 THSD4Q6ZMP0 1018 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 TMPRSS11FQ6ZWK6 438 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 ANKRD37Q7Z713 158 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 LRRC28Q86X40 367 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 C12orf45Q8N5I9 185 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 SPICQ8N5J4 248 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 NFAM1Q8NET5 270 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 OR5M3Q8NGP4 307 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 OR13C2Q8NGS9 318 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 OR56B4Q8NH76 319 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 HSD17B8Q92506 261 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 LRR1Q96L50 414 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 TRIM2Q9C040 744 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 METTL17Q9H7H0 456 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 MRPS18AQ9NVS2 196 aaKnown RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 SPIN1Q9Y657 262 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-201ENST00000317677 PCNX3Q9H6A9 2034 aa11.84□□□□□ -0.51
CPNE1-201ENST00000317677 VSTM2BA6NLU5 285 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ANXA2P2A6NMY6 339 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 IDSB3KWA1 339 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SULT1C2O00338 296 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ADAM10O14672 748 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SURF4O15260 269 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SGCEO43556 437 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 TSPAN2O60636 221 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 PRAF2O60831 178 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ICOSLGO75144 302 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ITGA10O75578 1167 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RGS11O94810 467 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 HTR3BO95264 441 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RAB36O95755 333 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SYPP08247 313 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SPI1P17947 270 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ELK1P19419 428 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 MST1P26927 711 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RBMS1P29558 406 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 NR0B1P51843 470 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ZFP36L1Q07352 338 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SKP2Q13309 424 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 MADCAM1Q13477 382 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SLC36A2Q495M3 483 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ALG10BQ5I7T1 473 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF550Q7Z398 422 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 COQ8AQ8NI60 647 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 NANPQ8TBE9 248 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 DAZLQ92904 295 aaKnown RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 TMEM203Q969S6 136 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 BPIFA2Q96DR5 249 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 ADOQ96SZ5 270 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 SPSB2Q99619 263 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 WDR77Q9BQA1 342 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 TINAGL1Q9GZM7 467 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-201ENST00000317677 OR52D1Q9H346 318 aa11.83□□□□□ -0.52
CPNE1-201ENST00000317677 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms