RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CLDN10P78369 228 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 ACOT6Q3I5F7 207 aaPredicted RBP14.34□□□□□ -0.11
HCFC1-201ENST00000310441 FAM72AQ5TYM5 149 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 PM20D1Q6GTS8 502 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 FRMPD2BQ6IN97 320 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 FAM72DQ6L9T8 149 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 FAM72BQ86X60 149 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 SLC7A5P1Q8MH63 180 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 C5AR2Q9P296 337 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 HSFX1Q9UBD0 423 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 CEP290O15078 2479 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 MFAP5Q13361 173 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 LYSMD4Q5XG99 296 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 OR2G3Q8NGZ4 309 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 TRAV36DV7A0A075B6V5 113 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 OR6C68A6NDL8 312 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 PRSS44E7EML9 344 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 SYT5O00445 386 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 GLCEO94923 617 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 YPEL5P62699 121 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 HTR4Q13639 388 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 PDLIM5Q96HC4 596 aaKnown RBP14.34□□□□□ -0.11
HCFC1-201ENST00000310441 PDCD1LG2Q9BQ51 273 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 APOOQ9BUR5 198 aa14.34□□□□□ -0.11
HCFC1-201ENST00000310441 MYOCOSA0A1B0GUC4 107 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 RAF1P04049 648 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 HOXD13P35453 343 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 P2RY2P41231 377 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 GABREP78334 506 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 OR13C8Q8NGS7 320 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 MED16Q9Y2X0 877 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 PXDC1Q5TGL8 231 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 RANBP10Q6VN20 620 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 MFSD9Q8NBP5 474 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 TMEM18Q96B42 140 aa14.33□□□□□ -0.11
HCFC1-201ENST00000310441 NACAE9PAV3 2078 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 ABHD16AO95870 558 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 SLC17A1Q14916 467 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 HNRNPA1L2Q32P51 320 aaKnown RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 TMEM217Q8N7C4 229 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 TECTBQ96PL2 329 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 DOCK11Q5JSL3 2073 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 DEGS1O15121 323 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 STAG3L2P0CL84 134 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 SNRPGP62308 76 aaKnown RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 EMC4Q5J8M3 183 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 TIPARPQ7Z3E1 657 aaKnown RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 FER1L6-AS2Q96M78 137 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 CRLF2Q9HC73 371 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 DLL4Q9NR61 685 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 RAD1O60671 282 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 GIPP09681 153 aaPredicted RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 MRPL19P49406 292 aaKnown RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 TPMTP51580 245 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 RAB33AQ14088 237 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 TESK1Q15569 626 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 KCTD11Q693B1 232 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 MCATQ8IVS2 390 aaKnown RBP14.33□□□□□ -0.12
HCFC1-201ENST00000310441 MTCH1Q9NZJ7 389 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 SLC1A3P43003 542 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 KCNJ10P78508 379 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 PKMYT1Q99640 499 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 NUDT22Q9BRQ3 303 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 FAM183AA6NL82 134 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 IQCF3P0C7M6 154 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 PRR22Q8IZ63 422 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 NMES1Q9C002 83 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 SPHK1Q9NYA1 384 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 PIGLQ9Y2B2 252 aa14.33□□□□□ -0.12
HCFC1-201ENST00000310441 LDB3O75112 727 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF140P52738 457 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-201ENST00000310441 RAB38P57729 211 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 EXT1Q16394 746 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 IAH1Q2TAA2 248 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-201ENST00000310441 BCL7AQ4VC05 210 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 OR5M8Q8NGP6 311 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 SLC25A43Q8WUT9 341 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-201ENST00000310441 A4GALTQ9NPC4 353 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 OSGIN2Q9Y236 505 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 CPN1P15169 458 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 RPL7L1Q6DKI1 246 aaKnown RBP14.32□□□□□ -0.12
HCFC1-201ENST00000310441 OR10Z1Q8NGY1 313 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 IL37Q9NZH6 218 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 M6PRP20645 277 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 DCDP81605 110 aaKnown RBP14.32□□□□□ -0.12
HCFC1-201ENST00000310441 FAM3DQ96BQ1 224 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 NEURL3Q96EH8 262 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 POLDIP2Q9Y2S7 368 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 TMEM235A6NFC5 223 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 RAB7AP51149 207 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF239Q16600 458 aaKnown RBP14.32□□□□□ -0.12
HCFC1-201ENST00000310441 LAX1Q8IWV1 398 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 NPWQ8N729 165 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 OR2AE1Q8NHA4 323 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 OR51I2Q9H344 312 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 DUSP6Q16828 381 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 OVCH1Q7RTY7 1134 aa14.32□□□□□ -0.12
HCFC1-201ENST00000310441 APCDD1Q8J025 514 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms