RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ICAM2P13598 275 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 PRSS12P56730 875 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 UBE2NLQ5JXB2 153 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 GLYATL3Q5SZD4 288 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 C3orf33Q6P1S2 294 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 C5orf34Q96MH7 638 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 MOGAT1Q96PD6 335 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 SERTM1A2A2V5 107 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 PIN1P1O15428 100 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 FBXO24O75426 580 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 UGT2B7P16662 529 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 C5AR1P21730 350 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 C19orf57Q0VDD7 668 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 BAMBIQ13145 260 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 SLC9A3R2Q15599 337 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 STAC2Q6ZMT1 411 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 C16orf47Q6ZP98 133 aaPredicted RBP13.28□□□□□ -0.28
PTPN9-201ENST00000306726 CDRT4Q8N9R6 151 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 CAMKVQ8NCB2 501 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 TOR1AIP2Q8NFQ8 470 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 STEAP2Q8NFT2 490 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 Q9N2J8 555 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 ACTR10Q9NZ32 417 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 MMP17Q9ULZ9 603 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 H7C2Y5 167 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 K7EQS6 105 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 SYT5O00445 386 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 ZNF432O94892 652 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 CYB5AP00167 134 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 SFTPBP07988 381 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
PTPN9-201ENST00000306726 ACTC1P68032 377 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 ACTA1P68133 377 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 HLA-DQA1Q5Y7H0 255 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 RCBTB1Q8NDN9 531 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 ANGPTL6Q8NI99 470 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 RSC1A1Q92681 617 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 DGAT2Q96PD7 388 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 CHD9Q3L8U1 2897 aa13.28□□□□□ -0.28
PTPN9-201ENST00000306726 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 PRSS38A1L453 326 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 H3BML4 177 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 PLPP2O43688 288 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 SC5DO75845 299 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 MPZL1O95297 269 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 IGHA1P01876 353 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 RRASP10301 218 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 ARHGAP19Q14CB8 494 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 WDR34Q96EX3 536 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 GPR137Q96N19 417 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 ACKR4Q9NPB9 350 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 PCDHB16Q9NRJ7 776 aa13.27□□□□□ -0.28
PTPN9-201ENST00000306726 PCDHGA9Q9Y5G4 932 aaKnown RBP13.27□□□□□ -0.28
PTPN9-201ENST00000306726 F8W036 122 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 GPR31O00270 319 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 TPMTP51580 245 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 DLX5P56178 289 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 BLOC1S1P78537 153 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 CD200R1LQ6Q8B3 271 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 CBLN2Q8IUK8 224 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 CMIPQ8IY22 773 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 OR2L8Q8NGY9 312 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 PGLYRP3Q96LB9 341 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 C20orf24Q9BUV8 137 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 IFT46Q9NQC8 304 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 FAM86C1Q9NVL1 165 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 ABRACLQ9P1F3 81 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 OR14I1A6ND48 311 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 ACOT7O00154 380 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 TO15178 435 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 SUSD5O60279 629 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF205O95201 554 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 KLF8O95600 359 aaPredicted RBP13.27□□□□□ -0.29
PTPN9-201ENST00000306726 GPR75O95800 540 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 FAM157BP0CG42 384 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 VSIG10L2P0DP72 767 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 SLC2A5P22732 501 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 CXCR1P25024 350 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 IGFALSP35858 605 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 CCINQ13939 588 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 NUDCD2Q8WVJ2 157 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.29
PTPN9-201ENST00000306726 ZFYVE21Q9BQ24 234 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 OR11A1Q9GZK7 315 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 VDAC3Q9Y277 283 aa13.27□□□□□ -0.29
PTPN9-201ENST00000306726 SULT1A3P0DMM9 295 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 SULT1A4P0DMN0 295 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 DLSTP36957 453 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 CAPZA1P52907 286 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 H2BFSP57053 126 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 TMEM41AQ96HV5 264 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 EXOGQ9Y2C4 368 aaKnown RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 ZDBF2Q9HCK1 2354 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms