RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 NOTOA8MTQ0 251 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 PRR32B1ATL7 298 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 FAM47E-STBD1D6RA91 191 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 CTLA4P16410 223 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RPS18P62269 152 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RAET1LQ5VY80 246 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 LCN10Q6JVE6 187 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM71Q6P5X7 295 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RHBDD1Q8TEB9 315 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF486Q96H40 463 aaPredicted RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RNF170Q96K19 258 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TIMP4Q99727 224 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 CHRNA10Q9GZZ6 450 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 SDHAF3Q9NRP4 125 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ING3Q9NXR8 418 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 MRPL39Q9NYK5 338 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TRAV36DV7A0A075B6V5 113 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TRAV18A0A075B6X5 111 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 FRG2CA6NGY1 282 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 PLPP2O43688 288 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 LIPCP11150 499 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 EPXP11678 715 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 PTBP1P26599 531 aaKnown RBP eCLIP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 BIDP55957 195 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 PRSS12P56730 875 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 BDH1Q02338 343 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 FAM69AQ5T7M9 428 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 C11orf88Q6PI97 169 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 LRRC28Q86X40 367 aaPredicted RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF687Q8N1G0 1237 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 SETD6Q8TBK2 473 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 IFI44Q8TCB0 444 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM234Q8WY98 164 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 S100A16Q96FQ6 103 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 GNRHR2Q96P88 292 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 CDCP1Q9H5V8 836 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RBFOX1Q9NWB1 397 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 FARSAQ9Y285 508 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TRABD2BA6NFA1 517 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 CDAP32320 146 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 RFC3P40938 356 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 MNDAP41218 407 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 SLC6A9P48067 706 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 IGLV3-21P80748 117 aaPredicted RBP8.4□□□□□ -1.06
PRDM9-201ENST00000296682 FOXF1Q12946 379 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 LINC00114Q6XXX2 140 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 NDUFAF7Q7L592 441 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 GRAMD2AQ8IUY3 354 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 CMTM4Q8IZR5 234 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 D2HGDHQ8N465 521 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 DVL3Q92997 716 aaPredicted RBP8.4□□□□□ -1.06
PRDM9-201ENST00000296682 KIAA1143Q96AT1 154 aaPredicted RBP8.4□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM43Q9BTV4 400 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 MFRPQ9BY79 579 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 ATG5Q9H1Y0 275 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 STMN3Q9NZ72 180 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 NBASA2RRP1 2371 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 ADAMTS9Q9P2N4 1935 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 TCRBV16S1A1N1A0A5B0 115 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 P2RX1P51575 399 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 ADGRG3Q86Y34 549 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 CMIPQ8IY22 773 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF285Q96NJ3 590 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 SLC22A11Q9NSA0 550 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 FBXL3Q9UKT7 428 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 SRPK3Q9UPE1 567 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 CACNG2Q9Y698 323 aa8.4□□□□□ -1.06
PRDM9-201ENST00000296682 BDP1A6H8Y1 2624 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 A8MVM7 634 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 NPIPB9F8W1W9 429 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 H2BFMP0C1H6 154 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 TMIGD3P0DMS9 266 aaPredicted RBP8.4□□□□□ -1.07
PRDM9-201ENST00000296682 SLC6A8P48029 635 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 GABRA4P48169 554 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 POLR2HP52434 150 aaKnown RBP8.4□□□□□ -1.07
PRDM9-201ENST00000296682 C19orf57Q0VDD7 668 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 GPR50Q13585 617 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 ALKBH1Q13686 389 aaKnown RBP8.4□□□□□ -1.07
PRDM9-201ENST00000296682 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.4□□□□□ -1.07
PRDM9-201ENST00000296682 DCXRQ7Z4W1 244 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 TMED4Q7Z7H5 227 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 OR6N1Q8NGY5 312 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 RPS4Y2Q8TD47 263 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 ADIPOR1Q96A54 375 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 UPRTQ96BW1 309 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 MSANTD3Q96H12 275 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 RBP7Q96R05 134 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 LAT2Q9GZY6 243 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 DPAGT1Q9H3H5 408 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 EMC7Q9NPA0 242 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 MRM2Q9UI43 246 aaKnown RBP8.4□□□□□ -1.07
PRDM9-201ENST00000296682 B9D1Q9UPM9 204 aa8.4□□□□□ -1.07
PRDM9-201ENST00000296682 TPRP12270 2363 aaKnown RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF726A6NNF4 738 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 TRIM3O75382 744 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 PLATP00750 562 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 FHL1Q13642 323 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 BCL2A1Q16548 175 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms