RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GFRA1P56159 465 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 RAC1P63000 192 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 TAB1Q15750 504 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 C9orf152Q5JTZ5 239 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 OR51G2Q8NGK0 314 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 GPX7Q96SL4 187 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 COMMD3Q9UBI1 195 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 REV1Q9UBZ9 1251 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 TBC1D24Q9ULP9 559 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 STSP08842 583 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 VAMP1P23763 118 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 IDUAP35475 653 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 TEKQ02763 1124 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 EGR4Q05215 589 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 MALLQ13021 153 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 IL18Q14116 193 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 SF3B4Q15427 424 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF74Q16587 644 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 LINC00303Q3SY05 128 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 BPIFA2Q96DR5 249 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 TMEM68Q96MH6 324 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 MBOAT4Q96T53 435 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 FEVQ99581 238 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC29A1Q99808 456 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 PTDSS2Q9BVG9 487 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 CORINQ9Y5Q5 1042 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 CDH10Q9Y6N8 788 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 DPPA5A6NC42 116 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 NPIPB13A6NJU9 1138 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 NPIPB4C9JG80 1138 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 IGHMP01871 453 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 HMGN1P05114 100 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 RANBP1P43487 201 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 AGFG1P52594 562 aaKnown RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 GBX2P52951 348 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 PRPS1P60891 318 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 SCGB2B2Q4G0G5 96 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM69AQ5T7M9 428 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 C1orf140Q5VVS0 124 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC46A3Q7Z3Q1 461 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 ZER1Q7Z7L7 766 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 RBMXL3Q8N7X1 1067 aaKnown RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 CYB561A3Q8NBI2 242 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 OR9Q2Q8NGE9 314 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 C9orf43Q8TAL5 461 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 PRR14Q9BWN1 585 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 MEPEQ9NQ76 525 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 PAQR5Q9NXK6 330 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 MTORP42345 2549 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 F8P00451 2351 aa7.58□□□□□ -1.2
PTPDC1-201ENST00000288976 A0A1W2PNV4 684 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 DENRO43583 198 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PIP5K1CO60331 668 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ASAH2BP0C7U1 165 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 IST1P53990 364 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FXYD6P3P58550 94 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ADARB1P78563 741 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZP4Q12836 540 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 OR7A5Q15622 319 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 LCN1P1Q5VSP4 162 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PFN4Q8NHR9 129 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 OSTF1Q92882 214 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF222Q9UK12 451 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 LRRC42Q9Y546 428 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM172BPA6NC97 362 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PDLIM1O00151 329 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC33A1O00400 549 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 IMPA2O14732 288 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 AQP4P55087 323 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PPIAP62937 165 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 POU4F3Q15319 338 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 DGUOKQ16854 277 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC36A3Q495N2 470 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 CCDC92Q53HC0 331 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 RBM48Q5RL73 367 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 MEX3DQ86XN8 651 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 SIAH3Q8IW03 269 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 POC5Q8NA72 575 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF524Q96C55 264 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 DIRAS2Q96HU8 199 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 BARD1Q99728 777 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PLSCR2Q9NRY7 297 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF701Q9NV72 531 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC7A11Q9UPY5 501 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 SPEF1Q9Y4P9 236 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM240BA0A1B0GVZ2 78 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FTCDNL1E5RQL4 147 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 DLGAP1O14490 977 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PDCD5O14737 125 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PTP4A3O75365 173 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 MRPL33O75394 65 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 CRYABP02511 175 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 GRK5P34947 590 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 CDH11P55287 796 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 CSNK2A1P68400 391 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 THOC7Q6I9Y2 204 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 RBMS3Q6XE24 437 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF620Q6ZNG0 422 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 USP51Q70EK9 711 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms