RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 ZPLD1Q8TCW7 415 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 PPP1R14AQ96A00 147 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 GAS2L1Q99501 681 aaPredicted RBP12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 ZNF350Q9GZX5 532 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 IFT46Q9NQC8 304 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 CGGBP1Q9UFW8 167 aaPredicted RBP12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 PLCL2Q9UPR0 1127 aa12.54□□□□□ -0.4
LPCAT1-201ENST00000283415 VCANP13611 3396 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 ZNF593O00488 134 aaPredicted RBP12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 GPR171O14626 319 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 RAF1P04049 648 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 PGAM2P15259 253 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 AGFG1P52594 562 aaKnown RBP12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 GUCA2AQ02747 115 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 SGCAQ16586 387 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 RPL13AP3Q6NVV1 102 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 NHLRC1Q6VVB1 395 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 TMEM41AQ96HV5 264 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 SPTAN1Q13813 2472 aaKnown RBP12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 AK1P00568 194 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 IL9P15248 144 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 PXKQ7Z7A4 578 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 TCTE3Q8IZS6 198 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 WDR77Q9BQA1 342 aaPredicted RBP12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 SEMA6CQ9H3T2 930 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 MLXQ9UH92 298 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 A0A0G2JK05 382 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 HNRNPKP61978 463 aaKnown RBP eCLIP12.53□□□□□ -0.45e-7■■■■□ 22.2
LPCAT1-201ENST00000283415 LTBQ06643 244 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 SFRP5Q5T4F7 317 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 SIGIRRQ6IA17 410 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 ADAMTS14Q8WXS8 1223 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 PMM1Q92871 262 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 ZNF436Q9C0F3 470 aaPredicted RBP12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 CYSLTR2Q9NS75 346 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 FGF21Q9NSA1 209 aa12.53□□□□□ -0.4
LPCAT1-201ENST00000283415 OR6C68A6NDL8 312 aa12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 POU3F1Q03052 451 aaPredicted RBP12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 METTL11BQ5VVY1 283 aa12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 ACBD4Q8NC06 268 aa12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 GABRG3Q99928 467 aa12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 ALKBH4Q9NXW9 302 aa12.52□□□□□ -0.4
LPCAT1-201ENST00000283415 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 BRINP1O60477 761 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 CTNSO60931 367 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 TRIM3O75382 744 aaPredicted RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 CBX7O95931 251 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 CYB5AP00167 134 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ATP1B1P05026 303 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 SPI1P17947 270 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 CD53P19397 219 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 CDK2P24941 298 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 SELENOPP49908 381 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ZBTB37Q5TC79 503 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 TIGD3Q6B0B8 471 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 TEX261Q6UWH6 196 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 RPS4Y2Q8TD47 263 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 FAM71F1Q96KD3 344 aaPredicted RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 MARVELD1Q9BSK0 173 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 VSX1Q9NZR4 365 aaPredicted RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 SCP2D1Q9UJQ7 156 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 DHDHQ9UQ10 334 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ZNF337Q9Y3M9 751 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 U3KQ87 197 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 PTP4A3O75365 173 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ADRB1P08588 477 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 PSG6Q00889 435 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 EIF2B1Q14232 305 aaKnown RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 C17orf107Q6ZR85 190 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ZBTB44Q8NCP5 570 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 CTHRC1Q96CG8 243 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 WDR76Q9H967 626 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 NRIP3Q9NQ35 241 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 SCML1Q9UN30 329 aa12.52□□□□□ -0.41
LPCAT1-201ENST00000283415 ICOSLGO75144 302 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 EPXP11678 715 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 ZNF28P17035 718 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 M6PRP20645 277 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 CCNOP22674 350 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 S100A10P60903 97 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 IKZF1Q13422 519 aa12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
LPCAT1-201ENST00000283415 PRICKLE4Q2TBC4 344 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms