RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
UPF3B-201ENST00000276201 EIF4E2O60573 245 aaKnown RBP9.39□□□□□ -0.91
UPF3B-201ENST00000276201 CDC123O75794 336 aaPredicted RBP9.39□□□□□ -0.91
UPF3B-201ENST00000276201 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 NID1P14543 1247 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 CD1CP29017 333 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 NOS3P29474 1203 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 AGTR1P30556 359 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 ART1P52961 327 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 LGALS3BPQ08380 585 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 NKAIN2Q5VXU1 208 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 SLC6A19Q695T7 634 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 ZCCHC12Q6PEW1 402 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 UNQ6494/PRO21346Q6UXR6 183 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 RPTNQ6XPR3 784 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 MOB3CQ70IA8 216 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 SLC35F2Q8IXU6 374 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 MFSD9Q8NBP5 474 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 OR2A1Q8NGT9 310 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 OR6N1Q8NGY5 312 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 CDS1Q92903 461 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 SDF2Q99470 211 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 NUDT22Q9BRQ3 303 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 CNTNAP3Q9BZ76 1288 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 OR51V1Q9H2C8 321 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 COPS3Q9UNS2 423 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF281Q9Y2X9 895 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 ENTPD2Q9Y5L3 495 aa9.39□□□□□ -0.91
UPF3B-201ENST00000276201 A0A1W2PNU3 283 aaPredicted RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 C4orf51C9J302 202 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CSF1P09603 554 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 PSMB5P28074 263 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CSF2RBP32927 897 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CBX5P45973 191 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 DIO1P49895 249 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 FGL1Q08830 312 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 FHL1Q13642 323 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CBFBQ13951 182 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF345Q14585 488 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 TOMM20Q15388 145 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 RPE65Q16518 533 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 TMEM69Q5SWH9 247 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 KRT77Q7Z794 578 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 C2orf73Q8N5S3 287 aaPredicted RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 OR13C2Q8NGS9 318 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 PFN4Q8NHR9 129 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 DERL3Q96Q80 235 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 C1QTNF6Q9BXI9 259 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 BARX1Q9HBU1 254 aaPredicted RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 NOX4Q9NPH5 578 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 C20orf141Q9NUB4 165 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 OR5V1Q9UGF6 321 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CHRNA9Q9UGM1 479 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 GPR160Q9UJ42 338 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 SLC6A5Q9Y345 797 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 LILRA5A6NI73 299 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 ERI3O43414 337 aaKnown RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 PRKRAO75569 313 aaKnown RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CD8AP01732 235 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 MRPL3P09001 348 aaKnown RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 RORAP35398 523 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 RAB28P51157 221 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 TAS2R20P59543 309 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CFHR1Q03591 330 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 TP53I3Q53FA7 332 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CLVS2Q5SYC1 327 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 USP53Q70EK8 1073 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 GLB1L2Q8IW92 636 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CCDC36Q8IYA8 594 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 AVL9Q8NBF6 648 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 LILRB1Q8NHL6 650 aaPredicted RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 OR14A2Q96R54 314 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 STACQ99469 402 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 MS4A7Q9GZW8 240 aaPredicted RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 UCK1Q9HA47 277 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 POT1Q9NUX5 634 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 SLC39A1Q9NY26 324 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 CLEC4AQ9UMR7 237 aa9.38□□□□□ -0.91
UPF3B-201ENST00000276201 MAP1BP46821 2468 aaKnown RBP9.38□□□□□ -0.91
UPF3B-201ENST00000276201 PQLC2LA1A4F0 135 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 PMS2P1A4D2B8 440 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 XRCC3O43542 346 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF432O94892 652 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SLC35G4P0C7Q5 338 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 EDNRAP25101 427 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ZFP36L1Q07352 338 aaKnown RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SQSTM1Q13501 440 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 GPR18Q14330 331 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 KIF26BQ2KJY2 2108 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms