RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 OR1L4Q8NGR5 311 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 F2RL3Q96RI0 385 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 LPAR4Q99677 370 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 C8orf33Q9H7E9 229 aaPredicted RBP14.66□□□□□ -0.06
UBR3-201ENST00000272793 OSMP13725 252 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 DLX1P56177 255 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 PMS2P11Q13670 270 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 ENTPD8Q5MY95 495 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 FAM122BQ7Z309 247 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 KLHDC8BQ8IXV7 354 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 C2orf15Q8WU43 125 aaKnown RBP14.66□□□□□ -0.06
UBR3-201ENST00000272793 BCL2L2Q92843 193 aaPredicted RBP14.66□□□□□ -0.06
UBR3-201ENST00000272793 ZMAT3Q9HA38 289 aaKnown RBP14.66□□□□□ -0.06
UBR3-201ENST00000272793 ELOVL3Q9HB03 270 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 TET3O43151 1660 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 TRAV27A0A087WT01 109 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 MRPL33O75394 65 aaKnown RBP14.66□□□□□ -0.06
UBR3-201ENST00000272793 GLIS1Q8NBF1 620 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 SLC22A11Q9NSA0 550 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 HHLA2Q9UM44 414 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 A0A1W2PP55 124 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 PRAMEF25A6NGN4 478 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 SPINK4O60575 86 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 CNMDO75829 334 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 WNT7BP56706 349 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 TOR2AQ5JU69 321 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 PRAMEF5Q5TYX0 476 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 PRAMEF6Q5VXH4 476 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 ATG101Q9BSB4 218 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 CD207Q9UJ71 328 aa14.66□□□□□ -0.06
UBR3-201ENST00000272793 PTRH2Q9Y3E5 179 aaKnown RBP14.66□□□□□ -0.06
UBR3-201ENST00000272793 TRBV11-1A0A0K0K1C0 115 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 BTNL3Q6UXE8 466 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 TPRG1Q6ZUI0 275 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 GPR78Q96P69 363 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 DPH7Q9BTV6 452 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 ZNF696Q9H7X3 374 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 PLEKHF2Q9H8W4 249 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 CYR61O00622 381 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 SLC36A2Q495M3 483 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 TSEN54Q7Z6J9 526 aaKnown RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 SPOCK3Q9BQ16 436 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 DNMT3BQ9UBC3 853 aaKnown RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 SCAMP2O15127 329 aaKnown RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 CRISP2P16562 243 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 FLT3LGP49771 235 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 AJAP1Q9UKB5 411 aaPredicted RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 ZNF337Q9Y3M9 751 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 A0A1W2PPQ1 181 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 BCAT2O15382 392 aaPredicted RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 HBQ1P09105 142 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 MMP7P09237 267 aaPredicted RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 FUT1P19526 365 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 HIST1H3AP68431 136 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 LCN15Q6UWW0 184 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 OR52L2PQ8NGH6 319 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 CMBLQ96DG6 245 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 CALHM2Q9HA72 323 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 UNGP13051 313 aaPredicted RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 MYF6P23409 242 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 PAX5Q02548 391 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 AMIGO3Q86WK7 504 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 PKMYT1Q99640 499 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 KIAA1217Q5T5P2 1943 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 ZNF324O75467 553 aaPredicted RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 SRMP19623 302 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 HOXA4Q00056 320 aaPredicted RBP14.65□□□□□ -0.06
UBR3-201ENST00000272793 HTR4Q13639 388 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 PROX2Q3B8N5 592 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 AMMECR1LQ6DCA0 310 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 ZNF687Q8N1G0 1237 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 DMAC2Q9NW81 257 aa14.65□□□□□ -0.06
UBR3-201ENST00000272793 TRMT61AQ96FX7 289 aaKnown RBP14.64□□□□□ -0.07
UBR3-201ENST00000272793 TMEM231Q9H6L2 316 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 SIRT3Q9NTG7 399 aaPredicted RBP14.64□□□□□ -0.07
UBR3-201ENST00000272793 DOK5Q9P104 306 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 FAM198AQ9UFP1 575 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 B3GALT5Q9Y2C3 310 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 NFS1Q9Y697 457 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 SLC25A4P12235 298 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 SIRPAP78324 504 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 C17orf105B2RV13 164 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 CACNG3O60359 315 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 FGF3P11487 239 aaPredicted RBP14.64□□□□□ -0.07
UBR3-201ENST00000272793 IRF4Q15306 451 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 ZNF789Q5FWF6 425 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 C6orf201Q7Z4U5 140 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 RETREG3Q86VR2 466 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 SLC5A8Q8N695 610 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 OR1J2Q8NGS2 313 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 APOBEC3BQ9UH17 382 aaKnown RBP14.64□□□□□ -0.07
UBR3-201ENST00000272793 ZNF281Q9Y2X9 895 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 EMC9Q9Y3B6 208 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 ECI1P42126 302 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 MMP14P50281 582 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 JAG1P78504 1218 aa14.64□□□□□ -0.07
UBR3-201ENST00000272793 FPGSQ05932 587 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms