RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 A6NIZ1 184 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SAC3D1A6NKF1 404 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 ZNF99A8MXY4 864 aaPredicted RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 DHHO43323 396 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SLC2A10O95528 541 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TXNDC12O95881 172 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 ZNF23P17027 643 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 GSTM3P21266 225 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SDHAP31040 664 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 CDKN2AP42771 156 aaKnown RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 DAPP51397 102 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 RPS6KA3P51812 740 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 ARHGDIAP52565 204 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 RAP1BP61224 184 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 RAP1AP62834 184 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TUBA1BP68363 451 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TUBA4AP68366 448 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 CD47Q08722 323 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 DBPQ10586 325 aaPredicted RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 KRR1Q13601 381 aaKnown RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 DAZAP2Q15038 168 aaPredicted RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 TBRG1Q3YBR2 411 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TIMM23BQ5SRD1 257 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SLC35F1Q5T1Q4 408 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 FAM205BPQ63HN1 556 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 GPR139Q6DWJ6 353 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 OR7E24Q6IFN5 339 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 FAHD1Q6P587 224 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SEZ6L2Q6UXD5 910 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 PTCHD4Q6ZW05 846 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TUBA1AQ71U36 451 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 ATG16L2Q8NAA4 619 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 OR4Q3Q8NH05 313 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 MAGEE2Q8TD90 523 aaPredicted RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 HSD17B8Q92506 261 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 C1QTNF6Q9BXI9 259 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SMURF2Q9HAU4 748 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SLC17A5Q9NRA2 495 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 STX18Q9P2W9 335 aaKnown RBP11.18□□□□□ -0.62
SS18-202ENST00000269138 SLC25A15Q9Y619 301 aa11.18□□□□□ -0.62
SS18-202ENST00000269138 SLC22A23A1A5C7 686 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 DEFB108AA8MXU0 73 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 CENPBD1B2RD01 187 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 G3V2T6 193 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 BHLHE40O14503 412 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 CASKO14936 926 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
SS18-202ENST00000269138 ANXA8P13928 327 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 B4GALT1P15291 398 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 CRYGSP22914 178 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 ZNF133P52736 654 aaPredicted RBP11.17□□□□□ -0.62
SS18-202ENST00000269138 SH3BGRP55822 239 aaPredicted RBP11.17□□□□□ -0.62
SS18-202ENST00000269138 COX10Q12887 443 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 PPA1Q15181 289 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 SLC36A3Q495N2 470 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 ANKRD16Q6P6B7 361 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 SLC25A47Q6Q0C1 308 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 KLHL24Q6TFL4 600 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 HIPK1Q86Z02 1210 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 C10orf67Q8IYJ2 551 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 ICA1LQ8NDH6 482 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 OR4K13Q8NH42 304 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 NSMAFQ92636 917 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 BOD1Q96IK1 185 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 ZNF556Q9HAH1 456 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 SLC24A3Q9HC58 644 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 ZNF226Q9NYT6 803 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 OAZ3Q9UMX2 235 aa11.17□□□□□ -0.62
SS18-202ENST00000269138 ZNF503-AS2A6NEH8 195 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 A6NNC1 897 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 XKRYO14609 159 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 ARPC3O15145 178 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 MITFO75030 526 aaPredicted RBP11.16□□□□□ -0.62
SS18-202ENST00000269138 HIST1H1CP16403 213 aaKnown RBP11.16□□□□□ -0.62
SS18-202ENST00000269138 POU1F1P28069 291 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 CDAP32320 146 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 TLE4Q04727 773 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 ETFDHQ16134 617 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 C10orf128Q5T292 105 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 ZNF813Q6ZN06 617 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 P2RY8Q86VZ1 359 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 ZDHHC13Q8IUH4 622 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 C17orf78Q8N4C9 275 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 IQCF1Q8N6M8 205 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 OR52L1Q8NGH7 329 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 MUCL1Q96DR8 90 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 RBP7Q96R05 134 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 FOXB1Q99853 325 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 USB1Q9BQ65 265 aaKnown RBP11.16□□□□□ -0.62
SS18-202ENST00000269138 TMEM38BQ9NVV0 291 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 NPAP1Q9NZP6 1156 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 KIF17Q9P2E2 1029 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 UGT2A1Q9Y4X1 527 aa11.16□□□□□ -0.62
SS18-202ENST00000269138 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms