RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PRSS27Q9BQR3 290 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 TMEM120AQ9BXJ8 343 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 MEPEQ9NQ76 525 aaPredicted RBP8.39□□□□□ -1.07
VPS41-201ENST00000265745 NANSQ9NR45 359 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 ARGLU1Q9NWB6 273 aaPredicted RBP8.39□□□□□ -1.07
VPS41-201ENST00000265745 GLTPQ9NZD2 209 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 ZNF229Q9UJW7 825 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 CMAHPQ9Y471 501 aa8.39□□□□□ -1.07
VPS41-201ENST00000265745 LOC100289279A0A1B0GTE1 492 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 KPNA4O00629 521 aaPredicted RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 RNF13O43567 381 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 NPPAP01160 153 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 HIST1H2ABP04908 130 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 SERPINA5P05154 406 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 ERCC1P07992 297 aaPredicted RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 ADRA2AP08913 450 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 PATE4P0C8F1 98 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 OR8G3PP0DMU2 310 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 APEHP13798 732 aaKnown RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 DAOP14920 347 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 ZNF23P17027 643 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 GIFP27352 417 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 GLRXP35754 106 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 PTDSS1P48651 473 aaKnown RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 SNTB2Q13425 540 aaKnown RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 IQCCQ4KMZ1 466 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 COQ5Q5HYK3 327 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 HIST3H2AQ7L7L0 130 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 SKA3Q8IX90 412 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 CDK20Q8IZL9 346 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 ZNF786Q8N393 782 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 SLC22A24Q8N4F4 322 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 ARIH2OSQ8N7S6 290 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 FGFBP3Q8TAT2 258 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 HIST1H2ACQ93077 130 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 ZNF566Q969W8 418 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 MRPL24Q96A35 216 aaKnown RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 SLC25A44Q96H78 314 aaPredicted RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 ZNF583Q96ND8 569 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 ECSITQ9BQ95 431 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 BPESC1Q9GZL8 116 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
VPS41-201ENST00000265745 LPAR3Q9UBY5 353 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 SH3GLB1Q9Y371 365 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 SPEF1Q9Y4P9 236 aa8.38□□□□□ -1.07
VPS41-201ENST00000265745 RTTNQ86VV8 2226 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 LOC100653049A0A140TA62 436 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 RNF212BA8MTL3 300 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 BLOC1S5-TXNDC5H3BN57 136 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 DHHO43323 396 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 SYNGR3O43761 229 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 KRT34O76011 436 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 UBL3O95164 117 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 RAB36O95755 333 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 BCL10O95999 233 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 MT-ND1P03886 318 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 QDPRP09417 244 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 PGA4P0DJD7 388 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 PGA3P0DJD8 388 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 FUT1P19526 365 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 RUNX1T1Q06455 604 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 KLF10Q13118 480 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 RIN1Q13671 783 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 RAB39AQ14964 217 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 FXNQ16595 210 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 HIST3H3Q16695 136 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 MMEL1Q495T6 779 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 FAM166AQ6J272 317 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 CARM1Q86X55 608 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 ZNF584Q8IVC4 421 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 UBASH3BQ8TF42 649 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 C10orf82Q8WW14 230 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 SEPHS2Q99611 448 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 MRPL13Q9BYD1 178 aaKnown RBP8.37□□□□□ -1.07
VPS41-201ENST00000265745 MRPL37Q9BZE1 423 aaKnown RBP8.37□□□□□ -1.07
VPS41-201ENST00000265745 SHARPINQ9H0F6 387 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 DYNLRB1Q9NP97 96 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 SAR1AQ9NR31 198 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 MRGBPQ9NV56 204 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 FGFR1OP2Q9NVK5 253 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 TMEM38BQ9NVV0 291 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 REV1Q9UBZ9 1251 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 RIMS3Q9UJD0 308 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 FBXL3Q9UKT7 428 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 BAG5Q9UL15 447 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 SVEP1Q4LDE5 3571 aa8.37□□□□□ -1.07
VPS41-201ENST00000265745 LRP5LA4QPB2 252 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 MRASO14807 208 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 SHOX2O60902 331 aaPredicted RBP8.36□□□□□ -1.07
VPS41-201ENST00000265745 ENTPD5O75356 428 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 OR5F1O95221 314 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 TGFAP01135 160 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 IGF2P01344 180 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 IFNA14P01570 189 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 TACSTD2P09758 323 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 TROVE2P10155 538 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS41-201ENST00000265745 UMPSP11172 480 aa8.36□□□□□ -1.07
VPS41-201ENST00000265745 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
VPS41-201ENST00000265745 TNFRSF1BP20333 461 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms