RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 HSD17B11Q8NBQ5 300 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM72A0PK05 275 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 HMGN2P05204 90 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM97Q5BJF2 176 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 PXT1Q8NFP0 134 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 MENTQ9BUN1 341 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 PTTG3PQ9NZH4 202 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ACOD1A6NK06 481 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 DOC2BQ14184 412 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SLC39A5Q6ZMH5 540 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 C1GALT1Q9NS00 363 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 CSF3P09919 207 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PROZP22891 400 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 BPIFB3P59826 476 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM182Q6ZP80 229 aaPredicted RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ZDHHC11BP0C7U3 371 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 AREGP15514 252 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 KEAP1Q14145 624 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ENTHD1Q8IYW4 607 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM208Q9BTX3 173 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF416Q9BWM5 594 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 TAF9BQ9HBM6 251 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 F5H697 171 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SRP14P37108 136 aaKnown RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 H3F3AP84243 136 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SLC12A9Q9BXP2 914 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 LINC00597Q9H2U6 94 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 BTNL2Q9UIR0 455 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PRDM4Q9UKN5 801 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 YTHDF2Q9Y5A9 579 aaKnown RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 MST1RQ04912 1400 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 FAM166BA8MTA8 275 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PENKP01210 267 aaPredicted RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 HAGHQ16775 308 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 LGALS14Q8TCE9 139 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 C11orf40Q8WZ69 217 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 OR8B4Q96RC9 309 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ZMAT3Q9HA38 289 aaKnown RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PSMB5P28074 263 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 WNT7BP56706 349 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SLCO5A1Q9H2Y9 848 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ATG2BQ96BY7 2078 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PPP5D1E7EU14 171 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ACP2P11117 423 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SELEP16581 610 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 CPEP16870 476 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF93P35789 620 aaPredicted RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 EIF2DP41214 584 aaKnown RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 RPE65Q16518 533 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SLC39A7Q92504 469 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 M0QYG6 137 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PRRG2O14669 202 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 SLC5A2P31639 672 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 CLEC14AQ86T13 490 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 NOL4LQ96MY1 436 aaPredicted RBP10.53□□□□□ -0.72
PTPN4-201ENST00000263708 PECRQ9BY49 303 aa10.53□□□□□ -0.72
PTPN4-201ENST00000263708 CDK5Q00535 292 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 DTWD2Q8NBA8 298 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 RNF141Q8WVD5 230 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 OR2M2Q96R28 347 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 A0A0U1RQS6 177 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 NPIPB15A6NHN6 443 aaPredicted RBP10.52□□□□□ -0.72
PTPN4-201ENST00000263708 TM4SF1P30408 202 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 OR10A3P58181 314 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 PGGHGQ32M88 737 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 KCNG3Q8TAE7 436 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 SIGLEC10Q96LC7 697 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 J3KTA2 159 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 SNRPBP14678 240 aaKnown RBP10.52□□□□□ -0.72
PTPN4-201ENST00000263708 OPRD1P41143 372 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 LCN8Q6JVE9 175 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 ALG12Q9BV10 488 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 FBXO8Q9NRD0 319 aa10.52□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF623O75123 536 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 PIAS2O75928 621 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 DCAF7P61962 342 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 GPLD1P80108 840 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 ADAMTS14Q8WXS8 1223 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 MOB3AQ96BX8 217 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 VAPAQ9P0L0 249 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 G3V3Q6 166 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 EIF3FO00303 357 aaPredicted RBP10.52□□□□□ -0.73
PTPN4-201ENST00000263708 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
PTPN4-201ENST00000263708 GIPRP48546 466 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 MDGA2Q7Z553 956 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 C19orf47Q8N9M1 422 aaKnown RBP10.52□□□□□ -0.73
PTPN4-201ENST00000263708 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
PTPN4-201ENST00000263708 FCRL1Q96LA6 429 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 CPPED1Q9BRF8 314 aaPredicted RBP10.52□□□□□ -0.73
PTPN4-201ENST00000263708 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 NUDT19A8MXV4 375 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 COX7A2P2O60397 106 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 ARSDP51689 593 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 IL10RAQ13651 578 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 STEAP1BQ6NZ63 245 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 VWA1Q6PCB0 445 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 ANKUB1A6NFN9 424 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 UTS2O95399 124 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms