RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ATF6BQ99941 703 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 METTL7AQ9H8H3 244 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 FKRPQ9H9S5 495 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 AHCTF1Q8WYP5 2266 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 CPAMD8Q8IZJ3 1885 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 KNTC1P50748 2209 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 PLA2G10O15496 165 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ZFAND5O76080 213 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 GLCEO94923 617 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 AKR7A3O95154 331 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 HLA-DQA2P01906 255 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 KLK3P07288 261 aaPredicted RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 OR2T7P0C7T2 308 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ACTC1P68032 377 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ACTA1P68133 377 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ZFP36L1Q07352 338 aaKnown RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 ACKR1Q16570 336 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ACSM3Q53FZ2 586 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 PYDC2Q56P42 97 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 LCN1P1Q5VSP4 162 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 GRINAQ7Z429 371 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 COMMD7Q86VX2 200 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 C7orf57Q8NEG2 295 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 OR6N2Q8NGY6 317 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 OR2T27Q8NH04 317 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 TSPAN10Q9H1Z9 355 aaPredicted RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 B3GAT2Q9NPZ5 323 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 NLKQ9UBE8 527 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 TRBV2A0A0J9YWF9 115 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 FABP12A6NFH5 140 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ANKRD61A6NGH8 418 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 TALDO1P37837 337 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 GDI2P50395 445 aaKnown RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 DUSP3P51452 185 aaPredicted RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 TMEM205Q6UW68 189 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 FAM198BQ6UWH4 519 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 MAMDC2Q7Z304 686 aaPredicted RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 NUBPLQ8TB37 319 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 THAP4Q8WY91 577 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 AKAP1Q92667 903 aaKnown RBP eCLIP12.24□□□□□ -0.45
VMP1-201ENST00000262291 ADAD1Q96M93 576 aaKnown RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 RASL10BQ96S79 203 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ING3Q9NXR8 418 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ZMAT5Q9UDW3 170 aaKnown RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 FBXL2Q9UKC9 423 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 EXPH5Q8NEV8 1989 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 A8MVM7 634 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 PLPP2O43688 288 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 OR6A2O95222 327 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 AHSA1O95433 338 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 PAHP00439 452 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 APEX1P27695 318 aaKnown RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 POU4F2Q12837 409 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 IL11RAQ14626 422 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 PCOLCEQ15113 449 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 P2RY14Q15391 338 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 MEP1BQ16820 701 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.24□□□□□ -0.452e-7■■■■■ 32.6
VMP1-201ENST00000262291 SLC25A35Q3KQZ1 300 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
VMP1-201ENST00000262291 DPY19L4Q7Z388 723 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 GPALPP1Q8IXQ4 340 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 EXD3Q8N9H8 876 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 LIPHQ8WWY8 451 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 OR14A2Q96R54 314 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 MED18Q9BUE0 208 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 CDCP1Q9H5V8 836 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 LIN7BQ9HAP6 207 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 ANKRD10Q9NXR5 420 aa12.24□□□□□ -0.45
VMP1-201ENST00000262291 LNP1A1A4G5 178 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 EFNA2O43921 213 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 FCER2P06734 321 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 CCKBRP32239 447 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 GBX2P52951 348 aaPredicted RBP12.23□□□□□ -0.45
VMP1-201ENST00000262291 NANOS3P60323 173 aaKnown RBP12.23□□□□□ -0.45
VMP1-201ENST00000262291 SIRPAP78324 504 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 ASAH1Q13510 395 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 DDI2Q5TDH0 399 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 CNIH2Q6PI25 160 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 SLC35D2Q76EJ3 337 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 POMGNT2Q8NAT1 580 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 THEM6Q8WUY1 208 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 AMELYQ99218 206 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 IKZF2Q9UKS7 526 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 KLF7O75840 302 aaPredicted RBP12.23□□□□□ -0.45
VMP1-201ENST00000262291 MPZL1O95297 269 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 LCN1P31025 176 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 C17orf67Q0P5P2 114 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 GGTLC2Q14390 218 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 ANGPT1Q15389 498 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 SF3A2Q15428 464 aaKnown RBP12.23□□□□□ -0.45
VMP1-201ENST00000262291 CFAP77Q6ZQR2 320 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms