RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PAQR6Q6TCH4 344 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 ZNF767PQ75MW2 155 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 HTRA1Q92743 480 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 KATNB1Q9BVA0 655 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 PRDM14Q9GZV8 571 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 ARPC4-TTLL3A0A0A6YYG9 625 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 LOC100130705A0A1B0GUX0 176 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 FZD7O75084 574 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 GIPRP48546 466 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 CTXN1P60606 82 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 MFSD13AQ14CX5 517 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 HDAC2Q92769 488 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 SARAFQ96BY9 339 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 ZAR1LA6NP61 321 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 NDUFA2O43678 99 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 AQP8O94778 261 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 EEF1B2P24534 225 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 EMC4Q5J8M3 183 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 TMEM225Q6GV28 225 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 CLDN22Q8N7P3 220 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 OR52L1Q8NGH7 329 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 ABHD3Q8WU67 409 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 RDH12Q96NR8 316 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 WARS2Q9UGM6 360 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 B3GALT5Q9Y2C3 310 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 IER3IP1Q9Y5U9 82 aa24.51■■□□□ 1.51
SMARCD3-201ENST00000262188 CLCA1A8K7I4 914 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 BHLHE40O14503 412 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 BCKDKO14874 412 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 SLC2A10O95528 541 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 ETV1P50549 477 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 AGFG1P52594 562 aaKnown RBP24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 PRPS1P60891 318 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 MELKQ14680 651 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 KRTCAP3Q53RY4 240 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 PDSS1Q5T2R2 415 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 ZNF585AQ6P3V2 769 aa24.5■■□□□ 1.51
SMARCD3-201ENST00000262188 E9PQ18 207 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 CDK5Q00535 292 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 POU3F1Q03052 451 aaPredicted RBP24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 C3P1Q6ZMU1 363 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 LIX1LQ8IVB5 337 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 ZNF555Q8NEP9 628 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 CPNE4Q96A23 557 aaPredicted RBP24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 ERMAPQ96PL5 475 aaPredicted RBP24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 MED29Q9NX70 200 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 GMPPBQ9Y5P6 360 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 ZFYVE26Q68DK2 2539 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 IMPA2O14732 288 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 TGM6O95932 706 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 TPOP07202 933 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 SLC6A6P31641 620 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 PGGHGQ32M88 737 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 SLC27A4Q6P1M0 643 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 GFRALQ6UXV0 394 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 RASD2Q96D21 266 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 Q96M85 177 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 MUS81Q96NY9 551 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 TM9SF2Q99805 663 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 NARFLQ9H6Q4 476 aa24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 NDRG4Q9ULP0 352 aaKnown RBP24.49■■□□□ 1.51
SMARCD3-201ENST00000262188 COL6A6A6NMZ7 2263 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 EIF1BO60739 113 aaKnown RBP24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 TALDO1P37837 337 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 ZNF45Q02386 682 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 FCRLAQ7L513 359 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 CHMP1BQ7LBR1 199 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 ZGRF1Q86YA3 2104 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 OR2T33Q8NG76 320 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 DYNC2LI1Q8TCX1 351 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 HRASLS5Q96KN8 279 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 BBC3Q96PG8 261 aaPredicted RBP24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 TSPAN32Q96QS1 320 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 POLDIP3Q9BY77 421 aaKnown RBP24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 SCPEP1Q9HB40 452 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 TIGARQ9NQ88 270 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 TVP23BQ9NYZ1 205 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 CLEC4AQ9UMR7 237 aa24.48■■□□□ 1.51
SMARCD3-201ENST00000262188 C12orf71A8MTZ7 269 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 CD163Q86VB7 1156 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 CPT1CQ8TCG5 803 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 ZHX1-C8orf76Q96EF9 292 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 WBP1Q96G27 269 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 TRIB1Q96RU8 372 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 NAA11Q9BSU3 229 aaPredicted RBP24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 TRAF4Q9BUZ4 470 aaPredicted RBP24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 EMC6Q9BV81 110 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 NRIP3Q9NQ35 241 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 POLE4Q9NR33 117 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 GPR52Q9Y2T5 361 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 PCDHGB1Q9Y5G3 927 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 SLC16A6O15403 523 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 IFNGR1P15260 489 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 ACKR1Q16570 336 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 RPL13AP3Q6NVV1 102 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 TMEM80Q96HE8 168 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 MMP27Q9H306 513 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 ENOPH1Q9UHY7 261 aa24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 ZNF346Q9UL40 294 aaKnown RBP24.47■■□□□ 1.51
SMARCD3-201ENST00000262188 OR14I1A6ND48 311 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms