RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TSPAN19P0C672 248 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 NOS3P29474 1203 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 POLR2IP36954 125 aaKnown RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 IL5RAQ01344 420 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 POU4F3Q15319 338 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MS4A18Q3C1V0 323 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 FBXL19-AS1Q494R0 122 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ALG10Q5BKT4 473 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MEDAGQ5VYS4 303 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 C12orf73Q69YU5 71 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 GPR139Q6DWJ6 353 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 TMEM225Q6GV28 225 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF474Q6S9Z5 364 aaPredicted RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 TFAP2EQ6VUC0 442 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 HDDC2Q7Z4H3 204 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 GPAT4Q86UL3 456 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MEX3DQ86XN8 651 aaKnown RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 KIF18BQ86Y91 864 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 LNX2Q8N448 690 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ZIC4Q8N9L1 334 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF610Q8N9Z0 462 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 OR9K2Q8NGE7 335 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 FAM81AQ8TBF8 368 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 SAMD8Q96LT4 415 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF385AQ96PM9 386 aaKnown RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 POLDIP3Q9BY77 421 aaKnown RBP10.24□□□□□ -0.77
PFDN1-201ENST00000261813 EGLN3Q9H6Z9 239 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 MCCC2Q9HCC0 563 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 FANCFQ9NPI8 374 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 EMC3Q9P0I2 261 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 KLHL21Q9UJP4 597 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 BLOC1S6Q9UL45 172 aa10.24□□□□□ -0.77
PFDN1-201ENST00000261813 NPIPB13A6NJU9 1138 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 NPIPB4C9JG80 1138 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 PLPP3O14495 311 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 GPR171O14626 319 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 CD14P08571 375 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 ADORA3P0DMS8 318 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 COL8A1P27658 744 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 UQCRC1P31930 480 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 PCYT1AP49585 367 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 CXCR4P61073 352 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 ISL1P61371 349 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 SNRPGP62308 76 aaKnown RBP10.23□□□□□ -0.77
PFDN1-201ENST00000261813 MYBPC1Q00872 1141 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 SNAPC1Q16533 368 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 PGGHGQ32M88 737 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 SLC25A30Q5SVS4 291 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 FAM205BPQ63HN1 556 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 PTCHD4Q6ZW05 846 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 CREB3L2Q70SY1 520 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 PXKQ7Z7A4 578 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 TMEM45BQ96B21 275 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 OXGR1Q96P68 337 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 RBM24Q9BX46 236 aaKnown RBP10.23□□□□□ -0.77
PFDN1-201ENST00000261813 FN3KQ9H479 309 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 NRIP3Q9NQ35 241 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 INIPQ9NRY2 104 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 CLN6Q9NWW5 311 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 TVP23BQ9NYZ1 205 aa10.23□□□□□ -0.77
PFDN1-201ENST00000261813 NOSIPQ9Y314 301 aaKnown RBP10.23□□□□□ -0.77
PFDN1-201ENST00000261813 A0A1W2PRG6 482 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 SH3D21A4FU49 640 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 RIIAD1A6NNX1 92 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 BHLHE40O14503 412 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 RNF13O43567 381 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 GNAO1P09471 354 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 HLA-DOBP13765 273 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 ZNF3P17036 446 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 PAICSP22234 425 aaKnown RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 AHCYP23526 432 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 EPHA2P29317 976 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 AQP2P41181 271 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 OR3A2P47893 321 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 DAP3P51398 398 aaKnown RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 CTXN1P60606 82 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 RPL18Q07020 188 aaKnown RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 PUDPQ08623 228 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 MAD2L1BPQ15013 274 aaPredicted RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 CLEC12AQ5QGZ9 265 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 NHLRC1Q6VVB1 395 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 SYT9Q86SS6 491 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 RHOXF1Q8NHV9 184 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 FBLIM1Q8WUP2 373 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 HDAC2Q92769 488 aaKnown RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 RNASE6Q93091 150 aaKnown RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 RFKQ969G6 155 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 PLA2G12AQ9BZM1 189 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 GALNT8Q9NY28 637 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 SCN3BQ9NY72 215 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 TAS2R5Q9NYW4 299 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 H2AFY2Q9P0M6 372 aaPredicted RBP10.22□□□□□ -0.77
PFDN1-201ENST00000261813 GRHPRQ9UBQ7 328 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 PRSS50Q9UI38 385 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 NOX1Q9Y5S8 564 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 DOPEY1Q5JWR5 2465 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 PCNX1Q96RV3 2341 aa10.22□□□□□ -0.77
PFDN1-201ENST00000261813 INTS1Q8N201 2190 aaKnown RBP10.21□□□□□ -0.77
PFDN1-201ENST00000261813 CELSR2Q9HCU4 2923 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms