RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 P2RY2P41231 377 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CDKN2CP42773 168 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CSNK1DP48730 415 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GNG10P50151 68 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 REEP5Q00765 189 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CYP24A1Q07973 514 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 NAB1Q13506 487 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 QRICH1Q2TAL8 776 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TMEM52BQ4KMG9 183 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PRR30Q53SZ7 412 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CDKL4Q5MAI5 379 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C1orf146Q5VVC0 180 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 UFSP1Q6NVU6 142 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF530Q6P9A1 599 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CCDC137Q6PK04 289 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 HSD11B1LQ7Z5J1 315 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 LHFPL3Q86UP9 236 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SLC13A5Q86YT5 568 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ENTHD1Q8IYW4 607 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TMEM123Q8N131 208 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 FBXL16Q8N461 479 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CLDN19Q8N6F1 224 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ALLCQ8N6M5 410 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 FBXL13Q8NEE6 735 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR2L3Q8NG85 312 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR51G2Q8NGK0 314 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR4D5Q8NGN0 318 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZPLD1Q8TCW7 415 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SETD7Q8WTS6 366 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RASSF5Q8WWW0 418 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RPL3LQ92901 407 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 MYLPFQ96A32 169 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 NTAN1Q96AB6 310 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CCDC124Q96CT7 223 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ECHDC3Q96DC8 303 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GLT1D1Q96MS3 346 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 AMDHD1Q96NU7 426 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TECTBQ96PL2 329 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 COPS8Q99627 209 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SLC30A2Q9BRI3 323 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TUBGCP2Q9BSJ2 902 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TMEM121Q9BTD3 319 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 POTEKPQ9BYX7 375 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ELOVL4Q9GZR5 314 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RACGAP1Q9H0H5 632 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 MYOZ2Q9NPC6 264 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RMND1Q9NWS8 449 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GID8Q9NWU2 228 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CMTM6Q9NX76 183 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 WARS2Q9UGM6 360 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SLC2A6Q9UGQ3 507 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ENPP5Q9UJA9 477 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PITPNC1Q9UKF7 332 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 IKZF2Q9UKS7 526 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PSMD13Q9UNM6 376 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GMPPBQ9Y5P6 360 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 NCAPD3P42695 1498 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PLB1Q6P1J6 1458 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 POLR3AO14802 1390 aaPredicted RBP3.26□□□□□ -1.89
CCDC54-201ENST00000261058 KIF24Q5T7B8 1368 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ERBINQ96RT1 1412 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PVALEFA0A1B0GWK0 134 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 RAB19A4D1S5 217 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 A8MUA0 341 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 A8MXQ7 604 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 COCHO43405 550 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 DEXIO95424 95 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 CLDN9O95484 217 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 KRT75O95678 551 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 APOC1P02654 83 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 SERPINE2P07093 398 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 SLC35E2P0CK97 266 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ETS2P15036 469 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 NQO2P16083 231 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PRPS1L1P21108 318 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 MMP11P24347 488 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 GDF1P27539 372 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 CDH5P33151 784 aaPredicted RBP3.26□□□□□ -1.89
CCDC54-201ENST00000261058 GYG1P46976 350 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ARRB1P49407 418 aaPredicted RBP3.26□□□□□ -1.89
CCDC54-201ENST00000261058 CDC34P49427 236 aaPredicted RBP3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PLA2G16P53816 162 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 AP1S2P56377 157 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PLP1P60201 277 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 OGDHQ02218 1023 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 IRF8Q02556 426 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PUDPQ08623 228 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 FLOT2Q14254 428 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ITIH4Q14624 930 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 GLYR1Q49A26 553 aaPredicted RBP3.26□□□□□ -1.89
CCDC54-201ENST00000261058 C6orf183Q5T699 404 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 MEDAGQ5VYS4 303 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 METTL21CQ5VZV1 264 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 SLC22A10Q63ZE4 541 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PVRIGQ6DKI7 326 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 TMIGD1Q6UXZ0 262 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PLEKHG7Q6ZR37 379 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ARCQ7LC44 396 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PAGE2Q7Z2X7 111 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 DPY19L4Q7Z388 723 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms