RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 GLYATL3Q5SZD4 288 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PRAMEF8Q5VWM4 474 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PRAMEF7Q5VXH5 474 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 STEAP1BQ6NZ63 245 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 KLHL15Q96M94 604 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 DGAT2Q96PD7 388 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 C7orf50Q9BRJ6 194 aaKnown RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 EVA1AQ9H8M9 152 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PTTG3PQ9NZH4 202 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 OPN4Q9UHM6 478 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 WDFY3Q8IZQ1 3526 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 A0A1B0GV50 99 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 FGF19O95750 216 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 AVPR2P30518 371 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 LSSP48449 732 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 FBXW4P57775 412 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 TMEM240Q5SV17 173 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF425Q6IV72 752 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 C3orf33Q6P1S2 294 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 USP53Q70EK8 1073 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 NAXEQ8NCW5 288 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 NPEPL1Q8NDH3 523 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 OR1J2Q8NGS2 313 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 METTL21AQ8WXB1 218 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 SLC38A3Q99624 504 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 AIFM2Q9BRQ8 373 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 FAM60AQ9NP50 221 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 SPTBN2O15020 2390 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 KIAA1671Q9BY89 1806 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 OIP5O43482 229 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 SLC16A7O60669 478 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 NDUFB6O95139 128 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 AKR7A3O95154 331 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 TGM6O95932 706 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 CYB5AP00167 134 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 CXADRP78310 365 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 HTRA4P83105 476 aaPredicted RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PSG6Q00889 435 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 C2orf76Q3KRA6 126 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 NHLRC3Q5JS37 347 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF776Q68DI1 518 aaPredicted RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 OR52W1Q6IF63 320 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 C12orf45Q8N5I9 185 aaPredicted RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 POMGNT2Q8NAT1 580 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 SLC22A18Q96BI1 424 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ASB16Q96NS5 453 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 KLHDC3Q9BQ90 382 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PARP12Q9H0J9 701 aaKnown RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 DNAJB12Q9NXW2 375 aaKnown RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 MRM2Q9UI43 246 aaKnown RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ANKRD20A5PA0PJZ0 165 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 OGG1O15527 345 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 ALOX12BO75342 701 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 SLC25A12O75746 678 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 GABRA1P14867 456 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 GLULP15104 373 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF626Q68DY1 528 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 GPR148Q8TDV2 347 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 HAVCR1Q96D42 359 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.88□□□□□ -0.67
USHBP1-201ENST00000252597 PITHD1Q9GZP4 211 aaPredicted RBP10.88□□□□□ -0.67
USHBP1-201ENST00000252597 DUSP22Q9NRW4 184 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 GSKIPQ9P0R6 139 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 ENTPD2Q9Y5L3 495 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 LTBP2Q14767 1821 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 GVINP1Q7Z2Y8 2422 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 NCOR1O75376 2440 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 TMEM82A0PJX8 343 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 D6RAR5 112 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 GPR31O00270 319 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 ZP3P21754 424 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 IL32P24001 234 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 CD34P28906 385 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 DLSTP36957 453 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 CAPZA1P52907 286 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 ADPRHP54922 357 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 PLAURQ03405 335 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 HACD4Q5VWC8 232 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 HAGHLQ6PII5 290 aaPredicted RBP10.88□□□□□ -0.67
USHBP1-201ENST00000252597 CORO6Q6QEF8 472 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 BPIFB2Q8N4F0 458 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 PXT1Q8NFP0 134 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 OR14A16Q8NHC5 309 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 LHFPL5Q8TAF8 219 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 FAM3DQ96BQ1 224 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 VRK1Q99986 396 aaPredicted RBP10.88□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF416Q9BWM5 594 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 PLA2G2FQ9BZM2 168 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 CHRNA9Q9UGM1 479 aa10.88□□□□□ -0.67
USHBP1-201ENST00000252597 OR5K3A6NET4 321 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ATG12O94817 140 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 MPZL1O95297 269 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms