RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 CASRP41180 1078 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 PDX1P52945 283 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 PON3Q15166 354 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 AWAT1Q58HT5 328 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 JMJD6Q6NYC1 403 aaPredicted RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 ASPGQ86U10 573 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 JAGN1Q8N5M9 183 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF485Q8NCK3 441 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 MITD1Q8WV92 249 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 CMBLQ96DG6 245 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 CGGBP1Q9UFW8 167 aaPredicted RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 NDOR1Q9UHB4 597 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 NPTNQ9Y639 398 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 KNTC1P50748 2209 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 SNRNP200O75643 2136 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 TERTO14746 1132 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 SLC31A1O15431 190 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 ERI3O43414 337 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 C1QL1O75973 258 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 MMP7P09237 267 aaPredicted RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 SPI1P17947 270 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 LAP3P28838 519 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF85Q03923 595 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 STEAP1BQ6NZ63 245 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 FAM199XQ6PEV8 388 aaPredicted RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 RNF165Q6ZSG1 346 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 KDM8Q8N371 416 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 TMIEQ8NEW7 156 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 MRPL38Q96DV4 380 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 BSCL2Q96G97 398 aaPredicted RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 UBL7Q96S82 380 aaPredicted RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 C19orf43Q9BQ61 176 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 SIDT1Q9NXL6 827 aaKnown RBP13.72□□□□□ -0.21
HOXC12-201ENST00000243103 GVINP1Q7Z2Y8 2422 aa13.72□□□□□ -0.21
HOXC12-201ENST00000243103 RFPL4AA6NLU0 287 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 RFPL4AL1F8VTS6 287 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 HOXB5P09067 269 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 OR8U8P0C7N1 319 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 CCKBRP32239 447 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 MAPK8P45983 427 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF84P51523 738 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ELAVL2Q12926 359 aaKnown RBP13.71□□□□□ -0.21
HOXC12-201ENST00000243103 LYPLAL1Q5VWZ2 237 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 P4HA3Q7Z4N8 544 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 FAM174AQ8TBP5 190 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 APMAPQ9HDC9 416 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 FAM212BQ9NTI7 297 aaPredicted RBP13.71□□□□□ -0.21
HOXC12-201ENST00000243103 IER3IP1Q9Y5U9 82 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 PLXND1Q9Y4D7 1925 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 VWA8A3KMH1 1905 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 COLCA2A8K830 154 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ADAP1O75689 374 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ABOP16442 354 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 DHRS2Q13268 280 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 MEF2DQ14814 521 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 RNF212Q495C1 297 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ARHGAP11AQ6P4F7 1023 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 BPIFB2Q8N4F0 458 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 SPICQ8N5J4 248 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 GATSQ8NAP1 163 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 FAM71CQ8NEG0 241 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 NEURL3Q96EH8 262 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ALG14Q96F25 216 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 C14orf144Q96I85 54 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 CMKLR1Q99788 373 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 METTL8Q9H825 291 aaKnown RBP13.71□□□□□ -0.21
HOXC12-201ENST00000243103 NRIP3Q9NQ35 241 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 ABRACLQ9P1F3 81 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 FOXJ3Q9UPW0 622 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 Q9Y3F1 56 aa13.71□□□□□ -0.21
HOXC12-201ENST00000243103 FRYQ5TBA9 3013 aa13.71□□□□□ -0.22
HOXC12-201ENST00000243103 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 RNASEK-C17orf49H0YIS7 233 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 GATCO43716 136 aaKnown RBP13.7□□□□□ -0.22
HOXC12-201ENST00000243103 VEGFDO43915 354 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 ZGLP1P0C6A0 271 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 FHITP49789 147 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 RGS19P49795 217 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 ZNF343Q6P1L6 599 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 MISPQ8IVT2 679 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
HOXC12-201ENST00000243103 APOBEC4Q8WW27 367 aaKnown RBP13.7□□□□□ -0.22
HOXC12-201ENST00000243103 PMM1Q92871 262 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 GAL3ST4Q96RP7 486 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 NRSN2Q9GZP1 204 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 SLC45A1Q9Y2W3 748 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 MPDZO75970 2070 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 ARRDC5A6NEK1 342 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 KIAA0355O15063 1070 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 PIN1P1O15428 100 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 OR2A4O95047 310 aa13.7□□□□□ -0.22
HOXC12-201ENST00000243103 ZFPL1O95159 310 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms