RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SKA3Q8IX90 412 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 LRRC56Q8IYG6 542 aaPredicted RBP10.09□□□□□ -0.79
COPA-201ENST00000241704 STPG2Q8N412 459 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 BORCS8Q96FH0 119 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 CMSS1Q9BQ75 279 aaKnown RBP10.09□□□□□ -0.79
COPA-201ENST00000241704 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
COPA-201ENST00000241704 TINAGL1Q9GZM7 467 aaPredicted RBP10.09□□□□□ -0.79
COPA-201ENST00000241704 OR52D1Q9H346 318 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 LOXL2Q9Y4K0 774 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 PTPRFP10586 1907 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 GGT3PA6NGU5 568 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 OR6C65A6NJZ3 312 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 G3V3Y1 287 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 ETHE1O95571 254 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 CD79AP11912 226 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 GLB1P16278 677 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 PRKXP51817 358 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 RGS7BPQ6MZT1 257 aaPredicted RBP10.09□□□□□ -0.79
COPA-201ENST00000241704 UQCC3Q6UW78 93 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 ZNF227Q86WZ6 799 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 CYB561A3Q8NBI2 242 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 HAVCR1Q96D42 359 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 PCED1AQ9H1Q7 454 aa10.09□□□□□ -0.79
COPA-201ENST00000241704 A0A1W2PR48 441 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 IMPA2O14732 288 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ALOX12BO75342 701 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 AQP8O94778 261 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ZNF432O94892 652 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 GTF2F2P13984 249 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 OR7A5Q15622 319 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ABI3BPQ7Z7G0 1075 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 RPS19BP1Q86WX3 136 aaKnown RBP10.08□□□□□ -0.8
COPA-201ENST00000241704 RNF113BQ8IZP6 322 aaKnown RBP10.08□□□□□ -0.8
COPA-201ENST00000241704 PTDSS2Q9BVG9 487 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 C2orf42Q9NWW7 574 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 TAS2R8Q9NYW2 309 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 MED16Q9Y2X0 877 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 MMACHCQ9Y4U1 282 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ARRDC5A6NEK1 342 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 FAM74A7A6NL05 159 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 MCRIP1C9JLW8 97 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 KLRC4-KLRK1H3BQV0 150 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 FAM74A3Q4VXF1 159 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ABCA11PQ4W5N1 156 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 TMEM200AQ86VY9 491 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 MEX3DQ86XN8 651 aaKnown RBP10.08□□□□□ -0.8
COPA-201ENST00000241704 SLC7A13Q8TCU3 470 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 CST11Q9H112 138 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 MRPS2Q9Y399 296 aaKnown RBP10.08□□□□□ -0.8
COPA-201ENST00000241704 CBY1Q9Y3M2 126 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 IER3IP1Q9Y5U9 82 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 LMO7DNF2Z398 122 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
COPA-201ENST00000241704 BSGP35613 385 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 CDNFQ49AH0 187 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ZNF385BQ569K4 471 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 SFRP5Q5T4F7 317 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 WBP2NLQ6ICG8 309 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 ABHD12BQ7Z5M8 362 aaPredicted RBP10.08□□□□□ -0.8
COPA-201ENST00000241704 MMP21Q8N119 569 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 SLC16A11Q8NCK7 471 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 NINJ1Q92982 152 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 OR10A5Q9H207 317 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 SERGEFQ9UGK8 458 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 FLVCR2Q9UPI3 526 aa10.08□□□□□ -0.8
COPA-201ENST00000241704 TRBV5-3A0A0A0MS03 114 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.07□□□□□ -0.8
COPA-201ENST00000241704 PHYHO14832 338 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 MOSPD3O75425 235 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 SDHBP21912 280 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 CYB561P49447 251 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 LUMP51884 338 aaPredicted RBP10.07□□□□□ -0.8
COPA-201ENST00000241704 AKR1C2P52895 323 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 AKR1C1Q04828 323 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 KCNAB1Q14722 419 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 ACSM3Q53FZ2 586 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 OR8S1Q8NH09 359 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 OR52N1Q8NH53 320 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 BAHD1Q8TBE0 780 aaPredicted RBP10.07□□□□□ -0.8
COPA-201ENST00000241704 MUCL1Q96DR8 90 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 LOC100509620A0A075B734 347 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 GAPDHSO14556 408 aaPredicted RBP10.07□□□□□ -0.8
COPA-201ENST00000241704 FADS1O60427 444 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 SELENOPP49908 381 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 PGGHGQ32M88 737 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 GPR160Q9UJ42 338 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 SPTY2D1-AS1A0A0U1RR47 76 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 LINC00587B1AMM8 73 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 ELAVL4P26378 380 aaKnown RBP10.07□□□□□ -0.8
COPA-201ENST00000241704 GCH1P30793 250 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 RAD52P43351 418 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 RIDAP52758 137 aaKnown RBP10.07□□□□□ -0.8
COPA-201ENST00000241704 RHEBQ15382 184 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 NHLRC3Q5JS37 347 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 C3orf33Q6P1S2 294 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 IP6K3Q96PC2 410 aa10.07□□□□□ -0.8
COPA-201ENST00000241704 NGBQ9NPG2 151 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms